Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 AP000593.1-201ENST00000393668 712 ntBASIC16.11■□□□□ 0.17
CDH20Q9HBT6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 CROCCP3-202ENST00000420820 1947 ntBASIC16.11■□□□□ 0.17
CDH20Q9HBT6 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDH20Q9HBT6 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 AL031598.1-201ENST00000561511 1773 ntBASIC16.1■□□□□ 0.17
CDH20Q9HBT6 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 TMPOP1-202ENST00000424642 1267 ntBASIC16.1■□□□□ 0.17
CDH20Q9HBT6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 RN7SL850P-201ENST00000579959 291 ntBASIC16.1■□□□□ 0.17
CDH20Q9HBT6 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 AL023973.1-201ENST00000624619 620 ntBASIC16.1■□□□□ 0.17
CDH20Q9HBT6 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 HOXB1-202ENST00000577092 1414 ntBASIC16.1■□□□□ 0.17
CDH20Q9HBT6 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDH20Q9HBT6 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 RCN1P1-201ENST00000400413 996 ntBASIC16.09■□□□□ 0.17
CDH20Q9HBT6 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 AC009065.1-201ENST00000564055 1225 ntBASIC16.09■□□□□ 0.17
CDH20Q9HBT6 AC024243.1-201ENST00000609234 778 ntBASIC16.09■□□□□ 0.17
CDH20Q9HBT6 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.09■□□□□ 0.17
CDH20Q9HBT6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms