Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPENQ96T58 KRT8P32-201ENST00000512863 1461 ntBASIC16.56■□□□□ 0.24
SPENQ96T58 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SPENQ96T58 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.56■□□□□ 0.24
SPENQ96T58 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPENQ96T58 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SPENQ96T58 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPENQ96T58 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.56■□□□□ 0.24
SPENQ96T58 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SPENQ96T58 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.56■□□□□ 0.24
SPENQ96T58 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPENQ96T58 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.56■□□□□ 0.24
SPENQ96T58 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SPENQ96T58 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.56■□□□□ 0.24
SPENQ96T58 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.56■□□□□ 0.24
SPENQ96T58 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.56■□□□□ 0.24
SPENQ96T58 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.56■□□□□ 0.24
SPENQ96T58 AC134684.3-201ENST00000641758 218 ntBASIC16.56■□□□□ 0.24
SPENQ96T58 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC16.56■□□□□ 0.24
SPENQ96T58 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.56■□□□□ 0.24
SPENQ96T58 INTS4P1-201ENST00000438455 1935 ntBASIC16.56■□□□□ 0.24
SPENQ96T58 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SPENQ96T58 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPENQ96T58 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SPENQ96T58 AC132008.2-207ENST00000454517 770 ntBASIC16.56■□□□□ 0.24
SPENQ96T58 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.56■□□□□ 0.24
SPENQ96T58 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.56■□□□□ 0.24
SPENQ96T58 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SPENQ96T58 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.55■□□□□ 0.24
SPENQ96T58 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
SPENQ96T58 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
SPENQ96T58 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.55■□□□□ 0.24
SPENQ96T58 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.55■□□□□ 0.24
SPENQ96T58 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SPENQ96T58 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
SPENQ96T58 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.55■□□□□ 0.24
SPENQ96T58 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.55■□□□□ 0.24
SPENQ96T58 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SPENQ96T58 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SPENQ96T58 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.54■□□□□ 0.24
SPENQ96T58 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 KRT18P27-201ENST00000427733 1299 ntBASIC16.54■□□□□ 0.24
SPENQ96T58 AP006288.1-201ENST00000446065 395 ntBASIC16.54■□□□□ 0.24
SPENQ96T58 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.54■□□□□ 0.24
SPENQ96T58 RFPL4AP1-201ENST00000530883 850 ntBASIC16.54■□□□□ 0.24
SPENQ96T58 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.54■□□□□ 0.24
SPENQ96T58 AC145285.3-201ENST00000564603 959 ntBASIC16.54■□□□□ 0.24
SPENQ96T58 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.54■□□□□ 0.24
SPENQ96T58 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.54■□□□□ 0.24
SPENQ96T58 AC027601.4-201ENST00000611259 610 ntBASIC16.54■□□□□ 0.24
SPENQ96T58 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
SPENQ96T58 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SPENQ96T58 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
SPENQ96T58 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC16.54■□□□□ 0.24
SPENQ96T58 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
SPENQ96T58 NUS1P2-201ENST00000417358 873 ntBASIC16.54■□□□□ 0.24
SPENQ96T58 POM121L3P-201ENST00000419331 1163 ntBASIC16.54■□□□□ 0.24
SPENQ96T58 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.54■□□□□ 0.24
SPENQ96T58 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.54■□□□□ 0.24
SPENQ96T58 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.54■□□□□ 0.24
SPENQ96T58 AL591684.3-201ENST00000605187 298 ntBASIC16.54■□□□□ 0.24
SPENQ96T58 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.54■□□□□ 0.24
SPENQ96T58 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC16.54■□□□□ 0.24
SPENQ96T58 DNAJB3-202ENST00000449667 1266 ntBASIC16.54■□□□□ 0.24
SPENQ96T58 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SPENQ96T58 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.54■□□□□ 0.24
SPENQ96T58 Z98044.1-201ENST00000632503 1764 ntBASIC16.54■□□□□ 0.24
SPENQ96T58 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
SPENQ96T58 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
SPENQ96T58 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.53■□□□□ 0.24
SPENQ96T58 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPENQ96T58 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPENQ96T58 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.53■□□□□ 0.24
SPENQ96T58 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPENQ96T58 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SPENQ96T58 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.53■□□□□ 0.24
SPENQ96T58 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SPENQ96T58 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms