Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HMCN1Q96RW7 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AP001271.2-201ENST00000624018 1556 ntBASIC5.57□□□□□ -1.52
HMCN1Q96RW7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AC119751.2-201ENST00000504529 210 ntBASIC5.57□□□□□ -1.52
HMCN1Q96RW7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 GOLGA2P6-201ENST00000340929 2049 ntBASIC5.57□□□□□ -1.52
HMCN1Q96RW7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 C1orf229-201ENST00000623686 2258 ntBASIC5.57□□□□□ -1.52
HMCN1Q96RW7 DGCR5-201ENST00000399539 862 ntBASIC5.57□□□□□ -1.52
HMCN1Q96RW7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 NME1-207ENST00000480143 964 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AC099548.2-209ENST00000480264 625 ntBASIC5.57□□□□□ -1.52
HMCN1Q96RW7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 CD63-210ENST00000550776 870 ntTSL 5 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 TMPRSS11CP-201ENST00000453277 683 ntBASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AC079328.1-201ENST00000560358 952 ntBASIC5.57□□□□□ -1.52
HMCN1Q96RW7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 NAA38-206ENST00000576384 424 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AC004706.3-202ENST00000621574 984 ntBASIC5.57□□□□□ -1.52
HMCN1Q96RW7 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC5.57□□□□□ -1.52
HMCN1Q96RW7 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMCN1Q96RW7 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HMCN1Q96RW7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMCN1Q96RW7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HMCN1Q96RW7 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HMCN1Q96RW7 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms