Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.49■□□□□ 0.71
CALR3Q96L12 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALR3Q96L12 KRT8P7-201ENST00000533003 1432 ntBASIC19.49■□□□□ 0.71
CALR3Q96L12 KRT8P50-201ENST00000562022 1438 ntBASIC19.49■□□□□ 0.71
CALR3Q96L12 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALR3Q96L12 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CALR3Q96L12 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.49■□□□□ 0.71
CALR3Q96L12 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALR3Q96L12 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CALR3Q96L12 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.49■□□□□ 0.71
CALR3Q96L12 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.48■□□□□ 0.71
CALR3Q96L12 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC19.48■□□□□ 0.71
CALR3Q96L12 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
CALR3Q96L12 ELP6-205ENST00000439305 880 ntTSL 2 BASIC19.48■□□□□ 0.71
CALR3Q96L12 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.48■□□□□ 0.71
CALR3Q96L12 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.48■□□□□ 0.71
CALR3Q96L12 AC116562.2-201ENST00000507042 360 ntBASIC19.48■□□□□ 0.71
CALR3Q96L12 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
CALR3Q96L12 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
CALR3Q96L12 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CALR3Q96L12 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.48■□□□□ 0.71
CALR3Q96L12 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.47■□□□□ 0.71
CALR3Q96L12 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.47■□□□□ 0.71
CALR3Q96L12 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 AC090340.1-201ENST00000620778 4980 ntBASIC19.47■□□□□ 0.71
CALR3Q96L12 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CALR3Q96L12 BUB3-202ENST00000368859 667 ntTSL 3 BASIC19.47■□□□□ 0.71
CALR3Q96L12 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
CALR3Q96L12 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.47■□□□□ 0.71
CALR3Q96L12 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.47■□□□□ 0.71
CALR3Q96L12 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.47■□□□□ 0.71
CALR3Q96L12 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.47■□□□□ 0.71
CALR3Q96L12 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.47■□□□□ 0.71
CALR3Q96L12 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC19.47■□□□□ 0.71
CALR3Q96L12 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC19.47■□□□□ 0.71
CALR3Q96L12 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CALR3Q96L12 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
CALR3Q96L12 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
CALR3Q96L12 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.47■□□□□ 0.71
CALR3Q96L12 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC19.47■□□□□ 0.71
CALR3Q96L12 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
CALR3Q96L12 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
CALR3Q96L12 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.46■□□□□ 0.71
CALR3Q96L12 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CALR3Q96L12 MIR3180-5-201ENST00000583743 153 ntBASIC19.46■□□□□ 0.71
CALR3Q96L12 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.46■□□□□ 0.71
CALR3Q96L12 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.46■□□□□ 0.71
CALR3Q96L12 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.46■□□□□ 0.71
CALR3Q96L12 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC19.46■□□□□ 0.71
CALR3Q96L12 GPAT2P1-201ENST00000444924 1672 ntBASIC19.46■□□□□ 0.71
CALR3Q96L12 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
CALR3Q96L12 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
CALR3Q96L12 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
CALR3Q96L12 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALR3Q96L12 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALR3Q96L12 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALR3Q96L12 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CALR3Q96L12 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CALR3Q96L12 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.45■□□□□ 0.7
CALR3Q96L12 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.45■□□□□ 0.7
CALR3Q96L12 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
CALR3Q96L12 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
CALR3Q96L12 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CALR3Q96L12 MIR149-201ENST00000384879 89 ntBASIC19.45■□□□□ 0.7
CALR3Q96L12 SAPCD2P4-201ENST00000424595 1171 ntBASIC19.45■□□□□ 0.7
CALR3Q96L12 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC19.45■□□□□ 0.7
CALR3Q96L12 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms