Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN23Q96B33 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN23Q96B33 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLDN23Q96B33 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CLDN23Q96B33 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.34■□□□□ 0.53
CLDN23Q96B33 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CLDN23Q96B33 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLDN23Q96B33 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN23Q96B33 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN23Q96B33 AC009102.3-201ENST00000623118 1491 ntBASIC18.33■□□□□ 0.53
CLDN23Q96B33 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.33■□□□□ 0.53
CLDN23Q96B33 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN23Q96B33 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.33■□□□□ 0.53
CLDN23Q96B33 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLDN23Q96B33 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN23Q96B33 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN23Q96B33 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN23Q96B33 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 RNA5SP416-201ENST00000516838 111 ntBASIC18.33■□□□□ 0.52
CLDN23Q96B33 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 UNC93B6-202ENST00000528242 690 ntBASIC18.33■□□□□ 0.52
CLDN23Q96B33 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 AC107918.4-202ENST00000641623 219 ntBASIC18.33■□□□□ 0.52
CLDN23Q96B33 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN23Q96B33 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN23Q96B33 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN23Q96B33 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLDN23Q96B33 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLDN23Q96B33 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.32■□□□□ 0.52
CLDN23Q96B33 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CLDN23Q96B33 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CLDN23Q96B33 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN23Q96B33 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN23Q96B33 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN23Q96B33 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN23Q96B33 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN23Q96B33 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN23Q96B33 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN23Q96B33 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN23Q96B33 LINC01006-201ENST00000333319 2292 ntBASIC18.31■□□□□ 0.52
CLDN23Q96B33 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.31■□□□□ 0.52
CLDN23Q96B33 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CLDN23Q96B33 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.3■□□□□ 0.52
CLDN23Q96B33 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLDN23Q96B33 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms