Protein–RNA interactions for Protein: Q969G3

SMARCE1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1, humanhuman

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1Q969G3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SMARCE1Q969G3 PKD1P1-201ENST00000458669 6805 ntBASIC20.75■□□□□ 0.91
SMARCE1Q969G3 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 ESPNP-201ENST00000270691 2015 ntBASIC20.75■□□□□ 0.91
SMARCE1Q969G3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 MIR564-202ENST00000385049 94 ntBASIC20.75■□□□□ 0.91
SMARCE1Q969G3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 AL023284.2-201ENST00000405850 579 ntBASIC20.75■□□□□ 0.91
SMARCE1Q969G3 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 SLC25A1P4-201ENST00000567977 778 ntBASIC20.75■□□□□ 0.91
SMARCE1Q969G3 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SMARCE1Q969G3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 MFAP1P1-201ENST00000442257 1255 ntBASIC20.74■□□□□ 0.91
SMARCE1Q969G3 MCCD1P1-208ENST00000445732 328 ntBASIC20.74■□□□□ 0.91
SMARCE1Q969G3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.74■□□□□ 0.91
SMARCE1Q969G3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 DENND3-207ENST00000518347 850 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 DGCR10-201ENST00000609839 495 ntBASIC20.74■□□□□ 0.91
SMARCE1Q969G3 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 AC008764.6-201ENST00000595909 2069 ntBASIC20.74■□□□□ 0.91
SMARCE1Q969G3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SMARCE1Q969G3 GPAT2P1-201ENST00000444924 1672 ntBASIC20.73■□□□□ 0.91
SMARCE1Q969G3 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SMARCE1Q969G3 TSPY20P-201ENST00000450910 630 ntBASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms