Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 FGFR3P6-201ENST00000457012 610 ntBASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SNIP1Q8TAD8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 AL157384.1-201ENST00000445995 2473 ntBASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 AL591424.1-201ENST00000442569 1213 ntBASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 AC012183.1-201ENST00000625197 499 ntBASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 AC083906.6-201ENST00000641366 219 ntBASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 AC079781.4-201ENST00000641908 219 ntBASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SNIP1Q8TAD8 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 MED15P5-201ENST00000423150 992 ntBASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 HNRNPDP1-201ENST00000439535 754 ntBASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 CD63-204ENST00000546939 779 ntTSL 3 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 AC027796.2-201ENST00000575326 344 ntBASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SNIP1Q8TAD8 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms