Protein–RNA interactions for Protein: Q8N609

TRAM1L1, Translocating chain-associated membrane protein 1-like 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1L1Q8N609 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 KRT89P-201ENST00000620027 1478 ntBASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 AL024508.2-201ENST00000607749 1894 ntBASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 GMCL1P1-201ENST00000463439 1581 ntBASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TRAM1L1Q8N609 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 KRT18P48-201ENST00000434763 852 ntBASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
TRAM1L1Q8N609 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 AL645929.1-201ENST00000420084 975 ntBASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 AC005332.1-201ENST00000577698 1310 ntBASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
TRAM1L1Q8N609 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
TRAM1L1Q8N609 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
TRAM1L1Q8N609 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 AL162741.1-201ENST00000565563 1558 ntBASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
TRAM1L1Q8N609 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms