Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 AF238378.1-201ENST00000526806 358 ntBASIC19.49■□□□□ 0.71
RNF135Q8IUD6 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 IGHV3-41-201ENST00000613121 348 ntBASIC19.49■□□□□ 0.71
RNF135Q8IUD6 AL773604.1-201ENST00000617417 272 ntBASIC19.49■□□□□ 0.71
RNF135Q8IUD6 REXO1L6P-202ENST00000619970 1078 ntBASIC19.49■□□□□ 0.71
RNF135Q8IUD6 TP73-AS1-207ENST00000624167 988 ntBASIC19.49■□□□□ 0.71
RNF135Q8IUD6 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 Z83836.1-201ENST00000624605 1642 ntBASIC19.49■□□□□ 0.71
RNF135Q8IUD6 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 PMS2P7-201ENST00000506558 1336 ntBASIC19.49■□□□□ 0.71
RNF135Q8IUD6 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 BX842568.4-201ENST00000421222 227 ntBASIC19.48■□□□□ 0.71
RNF135Q8IUD6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 AC098818.2-201ENST00000564925 2320 ntBASIC19.48■□□□□ 0.71
RNF135Q8IUD6 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
RNF135Q8IUD6 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 MIR3917-201ENST00000580971 93 ntBASIC19.47■□□□□ 0.71
RNF135Q8IUD6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 Z69720.1-201ENST00000601483 472 ntBASIC19.47■□□□□ 0.71
RNF135Q8IUD6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
RNF135Q8IUD6 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RNF135Q8IUD6 AL032819.2-201ENST00000624543 2162 ntBASIC19.46■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms