Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
LPCAT4Q643R3 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LPCAT4Q643R3 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LPCAT4Q643R3 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms