Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 KRT18P41-201ENST00000518924 1277 ntBASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 AL138781.1-201ENST00000566567 1274 ntBASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 AL645608.8-201ENST00000606034 2086 ntBASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 AL096828.2-201ENST00000567259 1965 ntBASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 STK4-201ENST00000372801 2038 ntTSL 2 BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LINC00242Q5T6M2 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 SNCG-201ENST00000348795 684 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 AC098934.4-201ENST00000564127 592 ntBASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
LINC00242Q5T6M2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 HLA-DQB1-201ENST00000374943 1656 ntBASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
LINC00242Q5T6M2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms