Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AC117947.1-201ENST00000427448 529 ntBASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AC139887.4-201ENST00000607877 719 ntBASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AC006011.2-201ENST00000621313 1158 ntBASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AL157888.1-201ENST00000631930 593 ntBASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.38■□□□□ 0.69
PTPN20Q4JDL3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 BX664615.1-201ENST00000443558 458 ntBASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 AC011558.1-201ENST00000623459 338 ntBASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 AC092865.7-201ENST00000641832 219 ntBASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
PTPN20Q4JDL3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 GMCL1P1-201ENST00000463439 1581 ntBASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 ABALON-201ENST00000629058 1903 ntBASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 RCN1P1-201ENST00000400413 996 ntBASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 YBX1P2-201ENST00000489612 999 ntBASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 AC009065.1-201ENST00000564055 1225 ntBASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 LINC01126-201ENST00000623515 1646 ntBASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
PTPN20Q4JDL3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 AL024508.2-201ENST00000607749 1894 ntBASIC19.35■□□□□ 0.69
PTPN20Q4JDL3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms