Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 RCN1P2-201ENST00000398357 915 ntBASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 AC068472.1-201ENST00000474589 881 ntBASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TRIM71Q2Q1W2 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 AC009102.3-201ENST00000623118 1491 ntBASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 AC007952.6-201ENST00000573168 2673 ntBASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 AC003957.1-201ENST00000625108 2673 ntBASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 AC018712.1-201ENST00000455767 687 ntBASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 AL161938.1-201ENST00000569833 2180 ntBASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 AL024508.2-201ENST00000607749 1894 ntBASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
TRIM71Q2Q1W2 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 SDHAP2-201ENST00000455183 2001 ntBASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 AC008608.2-201ENST00000606089 416 ntBASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TRIM71Q2Q1W2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 PMS2P1-201ENST00000431037 1228 ntBASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 AC243591.1-201ENST00000452967 1364 ntBASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms