Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.31■□□□□ 0.84
GPC3P51654 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.31■□□□□ 0.84
GPC3P51654 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.31■□□□□ 0.84
GPC3P51654 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.31■□□□□ 0.84
GPC3P51654 AC092329.2-201ENST00000598402 547 ntBASIC20.31■□□□□ 0.84
GPC3P51654 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
GPC3P51654 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
GPC3P51654 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.31■□□□□ 0.84
GPC3P51654 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.31■□□□□ 0.84
GPC3P51654 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC20.31■□□□□ 0.84
GPC3P51654 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
GPC3P51654 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
GPC3P51654 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
GPC3P51654 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC20.3■□□□□ 0.84
GPC3P51654 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
GPC3P51654 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.3■□□□□ 0.84
GPC3P51654 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC3P51654 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC3P51654 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.3■□□□□ 0.84
GPC3P51654 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC20.3■□□□□ 0.84
GPC3P51654 AP003733.1-201ENST00000491725 852 ntBASIC20.3■□□□□ 0.84
GPC3P51654 AC009065.1-201ENST00000564055 1225 ntBASIC20.3■□□□□ 0.84
GPC3P51654 AP002414.4-201ENST00000589764 1148 ntBASIC20.3■□□□□ 0.84
GPC3P51654 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC20.3■□□□□ 0.84
GPC3P51654 AC012313.10-201ENST00000623509 926 ntBASIC20.3■□□□□ 0.84
GPC3P51654 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC3P51654 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC20.3■□□□□ 0.84
GPC3P51654 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC3P51654 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC3P51654 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.3■□□□□ 0.84
GPC3P51654 Z83836.1-201ENST00000624605 1642 ntBASIC20.3■□□□□ 0.84
GPC3P51654 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
GPC3P51654 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC3P51654 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.29■□□□□ 0.84
GPC3P51654 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
GPC3P51654 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.29■□□□□ 0.84
GPC3P51654 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GPC3P51654 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC3P51654 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC3P51654 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GPC3P51654 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC20.29■□□□□ 0.84
GPC3P51654 AL163051.1-201ENST00000569214 1512 ntBASIC20.29■□□□□ 0.84
GPC3P51654 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC3P51654 BAALC-202ENST00000306391 243 ntTSL 5 BASIC20.29■□□□□ 0.84
GPC3P51654 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC3P51654 BAALC-204ENST00000330955 222 ntTSL 5 BASIC20.29■□□□□ 0.84
GPC3P51654 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC20.29■□□□□ 0.84
GPC3P51654 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
GPC3P51654 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.29■□□□□ 0.84
GPC3P51654 AC005332.3-201ENST00000589904 676 ntBASIC20.29■□□□□ 0.84
GPC3P51654 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
GPC3P51654 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
GPC3P51654 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.29■□□□□ 0.84
GPC3P51654 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.29■□□□□ 0.84
GPC3P51654 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
GPC3P51654 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC20.29■□□□□ 0.84
GPC3P51654 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.28■□□□□ 0.84
GPC3P51654 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
GPC3P51654 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
GPC3P51654 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
GPC3P51654 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.28■□□□□ 0.84
GPC3P51654 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC20.28■□□□□ 0.84
GPC3P51654 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.28■□□□□ 0.84
GPC3P51654 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.28■□□□□ 0.84
GPC3P51654 AL390719.2-201ENST00000606993 987 ntBASIC20.28■□□□□ 0.84
GPC3P51654 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.28■□□□□ 0.84
GPC3P51654 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.28■□□□□ 0.84
GPC3P51654 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
GPC3P51654 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
GPC3P51654 ANO7L1-203ENST00000602586 1720 ntBASIC20.27■□□□□ 0.84
GPC3P51654 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
GPC3P51654 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC3P51654 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
GPC3P51654 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GPC3P51654 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GPC3P51654 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
GPC3P51654 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC3P51654 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
GPC3P51654 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms