Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCA2P51587 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRCA2P51587 CRCP-205ENST00000431089 942 ntTSL 2 BASIC20.54■□□□□ 0.88
BRCA2P51587 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.54■□□□□ 0.88
BRCA2P51587 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.54■□□□□ 0.88
BRCA2P51587 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.54■□□□□ 0.88
BRCA2P51587 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.54■□□□□ 0.88
BRCA2P51587 AC011467.4-201ENST00000594891 528 ntBASIC20.54■□□□□ 0.88
BRCA2P51587 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
BRCA2P51587 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
BRCA2P51587 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCA2P51587 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCA2P51587 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCA2P51587 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCA2P51587 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
BRCA2P51587 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC20.53■□□□□ 0.88
BRCA2P51587 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.53■□□□□ 0.88
BRCA2P51587 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.53■□□□□ 0.88
BRCA2P51587 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.53■□□□□ 0.88
BRCA2P51587 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.53■□□□□ 0.88
BRCA2P51587 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC20.53■□□□□ 0.88
BRCA2P51587 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCA2P51587 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCA2P51587 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
BRCA2P51587 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.53■□□□□ 0.88
BRCA2P51587 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.53■□□□□ 0.88
BRCA2P51587 RNA5SP416-201ENST00000516838 111 ntBASIC20.53■□□□□ 0.88
BRCA2P51587 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC20.53■□□□□ 0.88
BRCA2P51587 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.53■□□□□ 0.88
BRCA2P51587 AC138761.1-201ENST00000584393 385 ntBASIC20.53■□□□□ 0.88
BRCA2P51587 CYP51A1P1-201ENST00000492267 1507 ntBASIC20.53■□□□□ 0.88
BRCA2P51587 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.53■□□□□ 0.88
BRCA2P51587 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
BRCA2P51587 AL357033.4-201ENST00000617703 1807 ntBASIC20.53■□□□□ 0.88
BRCA2P51587 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
BRCA2P51587 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
BRCA2P51587 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC20.52■□□□□ 0.88
BRCA2P51587 ELP6-205ENST00000439305 880 ntTSL 2 BASIC20.52■□□□□ 0.88
BRCA2P51587 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.52■□□□□ 0.88
BRCA2P51587 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRCA2P51587 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC20.52■□□□□ 0.88
BRCA2P51587 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.52■□□□□ 0.88
BRCA2P51587 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.52■□□□□ 0.88
BRCA2P51587 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
BRCA2P51587 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
BRCA2P51587 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
BRCA2P51587 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
BRCA2P51587 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
BRCA2P51587 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
BRCA2P51587 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
BRCA2P51587 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC20.52■□□□□ 0.87
BRCA2P51587 SYS1-203ENST00000414310 795 ntTSL 3 BASIC20.52■□□□□ 0.87
BRCA2P51587 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.52■□□□□ 0.87
BRCA2P51587 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.52■□□□□ 0.87
BRCA2P51587 AC093028.1-201ENST00000622998 982 ntBASIC20.52■□□□□ 0.87
BRCA2P51587 AC008735.5-201ENST00000623544 497 ntBASIC20.52■□□□□ 0.87
BRCA2P51587 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.51■□□□□ 0.87
BRCA2P51587 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.51■□□□□ 0.87
BRCA2P51587 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
BRCA2P51587 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC20.51■□□□□ 0.87
BRCA2P51587 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
BRCA2P51587 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 AC002310.6-201ENST00000624451 1377 ntBASIC20.51■□□□□ 0.87
BRCA2P51587 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
BRCA2P51587 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
BRCA2P51587 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC20.5■□□□□ 0.87
BRCA2P51587 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
BRCA2P51587 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRCA2P51587 INO80C-206ENST00000586489 594 ntTSL 3 BASIC20.5■□□□□ 0.87
BRCA2P51587 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
BRCA2P51587 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRCA2P51587 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.5■□□□□ 0.87
BRCA2P51587 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.5■□□□□ 0.87
BRCA2P51587 AP002472.1-201ENST00000577490 586 ntBASIC20.5■□□□□ 0.87
BRCA2P51587 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.5■□□□□ 0.87
BRCA2P51587 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.5■□□□□ 0.87
BRCA2P51587 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRCA2P51587 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
BRCA2P51587 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.5■□□□□ 0.87
BRCA2P51587 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC20.5■□□□□ 0.87
BRCA2P51587 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRCA2P51587 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
BRCA2P51587 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
BRCA2P51587 MCCD1P2-201ENST00000423228 335 ntBASIC20.5■□□□□ 0.87
BRCA2P51587 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC20.5■□□□□ 0.87
BRCA2P51587 RBM7-207ENST00000544582 692 ntTSL 3 BASIC20.5■□□□□ 0.87
BRCA2P51587 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.5■□□□□ 0.87
BRCA2P51587 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC20.5■□□□□ 0.87
BRCA2P51587 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms