Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 AF186996.4-201ENST00000467186 377 ntBASIC20.37■□□□□ 0.85
CPT1AP50416 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.37■□□□□ 0.85
CPT1AP50416 GPALPP1-207ENST00000611650 899 ntBASIC20.37■□□□□ 0.85
CPT1AP50416 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.37■□□□□ 0.85
CPT1AP50416 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.37■□□□□ 0.85
CPT1AP50416 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
CPT1AP50416 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.37■□□□□ 0.85
CPT1AP50416 MYLKP1-201ENST00000509077 1580 ntBASIC20.37■□□□□ 0.85
CPT1AP50416 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CPT1AP50416 AC112777.1-201ENST00000540175 1423 ntBASIC20.36■□□□□ 0.85
CPT1AP50416 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC20.36■□□□□ 0.85
CPT1AP50416 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 MED22-202ENST00000371999 987 ntTSL 3 BASIC20.36■□□□□ 0.85
CPT1AP50416 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.36■□□□□ 0.85
CPT1AP50416 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.36■□□□□ 0.85
CPT1AP50416 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC20.36■□□□□ 0.85
CPT1AP50416 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.36■□□□□ 0.85
CPT1AP50416 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.36■□□□□ 0.85
CPT1AP50416 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.36■□□□□ 0.85
CPT1AP50416 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.36■□□□□ 0.85
CPT1AP50416 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CPT1AP50416 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.36■□□□□ 0.85
CPT1AP50416 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CPT1AP50416 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CPT1AP50416 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CPT1AP50416 AFG3L1P-217ENST00000557444 2447 ntBASIC20.35■□□□□ 0.85
CPT1AP50416 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CPT1AP50416 AC132008.2-207ENST00000454517 770 ntBASIC20.35■□□□□ 0.85
CPT1AP50416 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.35■□□□□ 0.85
CPT1AP50416 RNA5SP419-201ENST00000515908 135 ntBASIC20.35■□□□□ 0.85
CPT1AP50416 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CPT1AP50416 AC008608.2-201ENST00000606089 416 ntBASIC20.35■□□□□ 0.85
CPT1AP50416 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CPT1AP50416 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CPT1AP50416 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.35■□□□□ 0.85
CPT1AP50416 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.35■□□□□ 0.85
CPT1AP50416 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.34■□□□□ 0.85
CPT1AP50416 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPT1AP50416 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPT1AP50416 SDHAP2-201ENST00000455183 2001 ntBASIC20.34■□□□□ 0.85
CPT1AP50416 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.34■□□□□ 0.85
CPT1AP50416 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
CPT1AP50416 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.34■□□□□ 0.85
CPT1AP50416 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPT1AP50416 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPT1AP50416 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPT1AP50416 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
CPT1AP50416 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.34■□□□□ 0.85
CPT1AP50416 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CPT1AP50416 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPT1AP50416 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.34■□□□□ 0.85
CPT1AP50416 AC068472.1-201ENST00000474589 881 ntBASIC20.34■□□□□ 0.85
CPT1AP50416 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.34■□□□□ 0.85
CPT1AP50416 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CPT1AP50416 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC20.34■□□□□ 0.85
CPT1AP50416 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.34■□□□□ 0.85
CPT1AP50416 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC20.34■□□□□ 0.85
CPT1AP50416 AC005336.2-201ENST00000593183 939 ntBASIC20.34■□□□□ 0.85
CPT1AP50416 AC009154.2-201ENST00000621177 724 ntBASIC20.34■□□□□ 0.85
CPT1AP50416 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.34■□□□□ 0.85
CPT1AP50416 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPT1AP50416 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.34■□□□□ 0.85
CPT1AP50416 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CPT1AP50416 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CPT1AP50416 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.34■□□□□ 0.85
CPT1AP50416 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CPT1AP50416 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPT1AP50416 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CPT1AP50416 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.34■□□□□ 0.85
CPT1AP50416 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms