Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CHRNA4P43681 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CHRNA4P43681 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.58■□□□□ 0.57
CHRNA4P43681 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.58■□□□□ 0.57
CHRNA4P43681 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA4P43681 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA4P43681 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.58■□□□□ 0.57
CHRNA4P43681 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA4P43681 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA4P43681 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA4P43681 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CHRNA4P43681 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA4P43681 AC018470.1-201ENST00000624790 3129 ntBASIC18.58■□□□□ 0.56
CHRNA4P43681 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CHRNA4P43681 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA4P43681 TERF1P1-201ENST00000311003 1181 ntBASIC18.58■□□□□ 0.56
CHRNA4P43681 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA4P43681 AC113347.1-201ENST00000413321 391 ntBASIC18.58■□□□□ 0.56
CHRNA4P43681 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.58■□□□□ 0.56
CHRNA4P43681 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CHRNA4P43681 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC18.58■□□□□ 0.56
CHRNA4P43681 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA4P43681 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.58■□□□□ 0.56
CHRNA4P43681 AL512604.3-201ENST00000569583 964 ntBASIC18.58■□□□□ 0.56
CHRNA4P43681 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.58■□□□□ 0.56
CHRNA4P43681 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
CHRNA4P43681 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA4P43681 AL023973.1-201ENST00000624619 620 ntBASIC18.58■□□□□ 0.56
CHRNA4P43681 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA4P43681 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA4P43681 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA4P43681 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC18.58■□□□□ 0.56
CHRNA4P43681 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA4P43681 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CHRNA4P43681 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.58■□□□□ 0.56
CHRNA4P43681 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
CHRNA4P43681 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.58■□□□□ 0.56
CHRNA4P43681 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CHRNA4P43681 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.57■□□□□ 0.56
CHRNA4P43681 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA4P43681 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.57■□□□□ 0.56
CHRNA4P43681 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 AC005521.1-201ENST00000393351 872 ntBASIC18.57■□□□□ 0.56
CHRNA4P43681 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.57■□□□□ 0.56
CHRNA4P43681 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC18.57■□□□□ 0.56
CHRNA4P43681 KRT18P57-201ENST00000443599 1254 ntBASIC18.57■□□□□ 0.56
CHRNA4P43681 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 NEK4P2-201ENST00000580004 1012 ntBASIC18.57■□□□□ 0.56
CHRNA4P43681 AC010240.3-201ENST00000607688 395 ntBASIC18.57■□□□□ 0.56
CHRNA4P43681 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.57■□□□□ 0.56
CHRNA4P43681 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.57■□□□□ 0.56
CHRNA4P43681 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CHRNA4P43681 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.57■□□□□ 0.56
CHRNA4P43681 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CHRNA4P43681 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA4P43681 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.56■□□□□ 0.56
CHRNA4P43681 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA4P43681 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHRNA4P43681 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.56■□□□□ 0.56
CHRNA4P43681 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CHRNA4P43681 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 LIN28AP1-201ENST00000429574 405 ntBASIC18.56■□□□□ 0.56
CHRNA4P43681 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 ATP5G1P1-201ENST00000448724 379 ntBASIC18.56■□□□□ 0.56
CHRNA4P43681 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.56■□□□□ 0.56
CHRNA4P43681 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.56■□□□□ 0.56
CHRNA4P43681 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CHRNA4P43681 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms