Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN7P35236 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN7P35236 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.05■□□□□ 0.64
PTPN7P35236 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTPN7P35236 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN7P35236 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.05■□□□□ 0.64
PTPN7P35236 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTPN7P35236 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PTPN7P35236 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
PTPN7P35236 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
PTPN7P35236 MIR718-201ENST00000390190 70 ntBASIC19.04■□□□□ 0.64
PTPN7P35236 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC19.04■□□□□ 0.64
PTPN7P35236 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
PTPN7P35236 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PTPN7P35236 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
PTPN7P35236 AC008550.1-201ENST00000511500 884 ntBASIC19.04■□□□□ 0.64
PTPN7P35236 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.04■□□□□ 0.64
PTPN7P35236 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PTPN7P35236 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
PTPN7P35236 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PTPN7P35236 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN7P35236 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.04■□□□□ 0.64
PTPN7P35236 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.04■□□□□ 0.64
PTPN7P35236 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTPN7P35236 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 AC005332.8-201ENST00000622750 2735 ntBASIC19.03■□□□□ 0.64
PTPN7P35236 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
PTPN7P35236 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PTPN7P35236 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN7P35236 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN7P35236 CCR12P-201ENST00000446203 998 ntBASIC19.03■□□□□ 0.64
PTPN7P35236 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN7P35236 BX088651.1-201ENST00000540551 451 ntBASIC19.03■□□□□ 0.64
PTPN7P35236 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PTPN7P35236 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.03■□□□□ 0.64
PTPN7P35236 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN7P35236 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.03■□□□□ 0.64
PTPN7P35236 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN7P35236 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN7P35236 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PTPN7P35236 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.03■□□□□ 0.64
PTPN7P35236 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 GNAS-203ENST00000306120 1878 ntBASIC19.03■□□□□ 0.64
PTPN7P35236 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.03■□□□□ 0.64
PTPN7P35236 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
PTPN7P35236 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTPN7P35236 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN7P35236 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN7P35236 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN7P35236 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN7P35236 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN7P35236 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN7P35236 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.02■□□□□ 0.64
PTPN7P35236 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.02■□□□□ 0.64
PTPN7P35236 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN7P35236 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
PTPN7P35236 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
PTPN7P35236 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.02■□□□□ 0.64
PTPN7P35236 AC093010.1-201ENST00000473625 1624 ntBASIC19.02■□□□□ 0.64
PTPN7P35236 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
PTPN7P35236 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN7P35236 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.63
PTPN7P35236 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN7P35236 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
PTPN7P35236 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN7P35236 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
PTPN7P35236 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms