Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC24.82■■□□□ 1.56
USP6P35125 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP6P35125 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
USP6P35125 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC24.82■■□□□ 1.56
USP6P35125 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP6P35125 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC24.82■■□□□ 1.56
USP6P35125 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
USP6P35125 MED16-201ENST00000269814 1199 ntTSL 5 BASIC24.82■■□□□ 1.56
USP6P35125 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP6P35125 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC24.82■■□□□ 1.56
USP6P35125 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC24.82■■□□□ 1.56
USP6P35125 AC011467.2-201ENST00000598425 242 ntBASIC24.82■■□□□ 1.56
USP6P35125 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC24.82■■□□□ 1.56
USP6P35125 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP6P35125 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
USP6P35125 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
USP6P35125 LINC01126-201ENST00000623515 1646 ntBASIC24.82■■□□□ 1.56
USP6P35125 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP6P35125 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC24.82■■□□□ 1.56
USP6P35125 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC24.81■■□□□ 1.56
USP6P35125 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6P35125 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6P35125 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC24.81■■□□□ 1.56
USP6P35125 MTCL1P1-201ENST00000446207 792 ntBASIC24.81■■□□□ 1.56
USP6P35125 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC24.81■■□□□ 1.56
USP6P35125 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC24.81■■□□□ 1.56
USP6P35125 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC24.81■■□□□ 1.56
USP6P35125 PAM16-208ENST00000573553 722 ntTSL 2 BASIC24.81■■□□□ 1.56
USP6P35125 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6P35125 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6P35125 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC24.81■■□□□ 1.56
USP6P35125 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
USP6P35125 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
USP6P35125 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
USP6P35125 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP6P35125 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC24.8■■□□□ 1.56
USP6P35125 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC24.8■■□□□ 1.56
USP6P35125 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC24.8■■□□□ 1.56
USP6P35125 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC24.8■■□□□ 1.56
USP6P35125 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC24.8■■□□□ 1.56
USP6P35125 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC24.8■■□□□ 1.56
USP6P35125 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC24.8■■□□□ 1.56
USP6P35125 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC24.8■■□□□ 1.56
USP6P35125 AC125634.1-201ENST00000438758 1403 ntBASIC24.8■■□□□ 1.56
USP6P35125 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
USP6P35125 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC24.8■■□□□ 1.56
USP6P35125 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC24.8■■□□□ 1.56
USP6P35125 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC24.8■■□□□ 1.56
USP6P35125 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
USP6P35125 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC24.8■■□□□ 1.56
USP6P35125 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP6P35125 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
USP6P35125 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC24.79■■□□□ 1.56
USP6P35125 HNRNPDP1-201ENST00000439535 754 ntBASIC24.79■■□□□ 1.56
USP6P35125 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP6P35125 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP6P35125 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC24.79■■□□□ 1.56
USP6P35125 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC24.79■■□□□ 1.56
USP6P35125 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC24.79■■□□□ 1.56
USP6P35125 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP6P35125 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
USP6P35125 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.79■■□□□ 1.56
USP6P35125 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
USP6P35125 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP6P35125 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC24.78■■□□□ 1.56
USP6P35125 DANCR-204ENST00000444958 709 ntTSL 3 BASIC24.78■■□□□ 1.56
USP6P35125 AC009533.2-201ENST00000543664 586 ntBASIC24.78■■□□□ 1.56
USP6P35125 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
USP6P35125 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC24.78■■□□□ 1.56
USP6P35125 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
USP6P35125 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC24.78■■□□□ 1.56
USP6P35125 COBL-210ENST00000632460 1941 ntTSL 5 BASIC24.78■■□□□ 1.56
USP6P35125 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP6P35125 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC24.78■■□□□ 1.56
USP6P35125 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP6P35125 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC24.78■■□□□ 1.56
USP6P35125 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC24.78■■□□□ 1.56
USP6P35125 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
USP6P35125 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC24.78■■□□□ 1.56
USP6P35125 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC24.78■■□□□ 1.56
USP6P35125 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC24.78■■□□□ 1.56
USP6P35125 FAM215A-202ENST00000632077 792 ntBASIC24.78■■□□□ 1.56
USP6P35125 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC24.78■■□□□ 1.56
USP6P35125 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
USP6P35125 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
USP6P35125 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC24.77■■□□□ 1.56
USP6P35125 PTGES2-AS1-201ENST00000443493 2100 ntBASIC24.77■■□□□ 1.56
USP6P35125 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
USP6P35125 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
USP6P35125 HIST2H3DP1-201ENST00000401004 416 ntBASIC24.77■■□□□ 1.56
USP6P35125 AC073648.2-201ENST00000510116 352 ntBASIC24.77■■□□□ 1.56
USP6P35125 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC24.77■■□□□ 1.56
USP6P35125 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC24.77■■□□□ 1.56
USP6P35125 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC24.77■■□□□ 1.56
USP6P35125 LITAF-211ENST00000572255 516 ntTSL 4 BASIC24.77■■□□□ 1.56
USP6P35125 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
USP6P35125 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC24.77■■□□□ 1.56
USP6P35125 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
USP6P35125 PAN3-AS1-201ENST00000563843 1351 ntBASIC24.77■■□□□ 1.56
USP6P35125 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms