Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC20.15■□□□□ 0.82
VTNP04004 AL845331.1-201ENST00000424978 1190 ntBASIC20.15■□□□□ 0.82
VTNP04004 AC104819.1-201ENST00000504587 486 ntBASIC20.15■□□□□ 0.82
VTNP04004 AC111152.3-201ENST00000569699 673 ntBASIC20.15■□□□□ 0.82
VTNP04004 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.15■□□□□ 0.82
VTNP04004 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
VTNP04004 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.15■□□□□ 0.82
VTNP04004 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
VTNP04004 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
VTNP04004 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
VTNP04004 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
VTNP04004 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.14■□□□□ 0.82
VTNP04004 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.14■□□□□ 0.81
VTNP04004 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
VTNP04004 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.14■□□□□ 0.81
VTNP04004 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
VTNP04004 AC091607.1-201ENST00000490318 1060 ntBASIC20.14■□□□□ 0.81
VTNP04004 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.14■□□□□ 0.81
VTNP04004 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC20.14■□□□□ 0.81
VTNP04004 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.14■□□□□ 0.81
VTNP04004 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.14■□□□□ 0.81
VTNP04004 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC20.14■□□□□ 0.81
VTNP04004 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
VTNP04004 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.14■□□□□ 0.81
VTNP04004 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.14■□□□□ 0.81
VTNP04004 AC138894.3-201ENST00000603787 634 ntBASIC20.14■□□□□ 0.81
VTNP04004 IFNL4P1-201ENST00000607083 540 ntBASIC20.14■□□□□ 0.81
VTNP04004 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.14■□□□□ 0.81
VTNP04004 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.14■□□□□ 0.81
VTNP04004 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
VTNP04004 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC20.14■□□□□ 0.81
VTNP04004 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
VTNP04004 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.14■□□□□ 0.81
VTNP04004 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.14■□□□□ 0.81
VTNP04004 AL024508.2-201ENST00000607749 1894 ntBASIC20.13■□□□□ 0.81
VTNP04004 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.13■□□□□ 0.81
VTNP04004 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
VTNP04004 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.13■□□□□ 0.81
VTNP04004 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC20.13■□□□□ 0.81
VTNP04004 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.13■□□□□ 0.81
VTNP04004 TSPY19P-201ENST00000418461 509 ntBASIC20.13■□□□□ 0.81
VTNP04004 TSPY18P-201ENST00000441642 509 ntBASIC20.13■□□□□ 0.81
VTNP04004 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 AP005901.3-202ENST00000581653 237 ntBASIC20.13■□□□□ 0.81
VTNP04004 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.13■□□□□ 0.81
VTNP04004 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.13■□□□□ 0.81
VTNP04004 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.13■□□□□ 0.81
VTNP04004 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
VTNP04004 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.13■□□□□ 0.81
VTNP04004 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.13■□□□□ 0.81
VTNP04004 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
VTNP04004 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
VTNP04004 ANO7L1-203ENST00000602586 1720 ntBASIC20.13■□□□□ 0.81
VTNP04004 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
VTNP04004 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.13■□□□□ 0.81
VTNP04004 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
VTNP04004 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.12■□□□□ 0.81
VTNP04004 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VTNP04004 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
VTNP04004 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
VTNP04004 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VTNP04004 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC20.12■□□□□ 0.81
VTNP04004 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
VTNP04004 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VTNP04004 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
VTNP04004 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
VTNP04004 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
VTNP04004 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.12■□□□□ 0.81
VTNP04004 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms