Protein–RNA interactions for Protein: O95832

CLDN1, Claudin-1, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1O95832 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 AL691432.2-201ENST00000607222 2038 ntBASIC16.43■□□□□ 0.22
CLDN1O95832 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN1O95832 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN1O95832 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN1O95832 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN1O95832 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN1O95832 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
CLDN1O95832 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 PMS2P2-201ENST00000425039 1128 ntBASIC16.43■□□□□ 0.22
CLDN1O95832 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN1O95832 KRT18P67-201ENST00000432816 1264 ntBASIC16.43■□□□□ 0.22
CLDN1O95832 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.43■□□□□ 0.22
CLDN1O95832 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.43■□□□□ 0.22
CLDN1O95832 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN1O95832 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN1O95832 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN1O95832 AC009065.1-201ENST00000564055 1225 ntBASIC16.43■□□□□ 0.22
CLDN1O95832 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN1O95832 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.43■□□□□ 0.22
CLDN1O95832 AC112497.1-201ENST00000624824 639 ntBASIC16.43■□□□□ 0.22
CLDN1O95832 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN1O95832 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.43■□□□□ 0.22
CLDN1O95832 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.43■□□□□ 0.22
CLDN1O95832 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CLDN1O95832 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN1O95832 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLDN1O95832 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN1O95832 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDN1O95832 RPL13AP23-201ENST00000480739 586 ntBASIC16.42■□□□□ 0.22
CLDN1O95832 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN1O95832 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDN1O95832 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN1O95832 AC027796.2-201ENST00000575326 344 ntBASIC16.42■□□□□ 0.22
CLDN1O95832 MIR3180-5-201ENST00000583743 153 ntBASIC16.42■□□□□ 0.22
CLDN1O95832 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDN1O95832 AL390719.2-201ENST00000606993 987 ntBASIC16.42■□□□□ 0.22
CLDN1O95832 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.42■□□□□ 0.22
CLDN1O95832 CCNC-219ENST00000627680 896 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN1O95832 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN1O95832 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.42■□□□□ 0.22
CLDN1O95832 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN1O95832 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.42■□□□□ 0.22
CLDN1O95832 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLDN1O95832 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN1O95832 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN1O95832 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN1O95832 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDN1O95832 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDN1O95832 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CLDN1O95832 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN1O95832 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN1O95832 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.41■□□□□ 0.22
CLDN1O95832 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
CLDN1O95832 AF186996.4-201ENST00000467186 377 ntBASIC16.41■□□□□ 0.22
CLDN1O95832 AC093909.1-201ENST00000504731 1122 ntBASIC16.41■□□□□ 0.22
CLDN1O95832 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.41■□□□□ 0.22
CLDN1O95832 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.41■□□□□ 0.22
CLDN1O95832 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.41■□□□□ 0.22
CLDN1O95832 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN1O95832 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.41■□□□□ 0.22
CLDN1O95832 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN1O95832 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLDN1O95832 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN1O95832 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN1O95832 AC125437.2-201ENST00000625180 2167 ntBASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms