Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.86■□□□□ 0.45
CNOT3O75175 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.86■□□□□ 0.45
CNOT3O75175 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 TSPY5P-201ENST00000426936 936 ntBASIC17.86■□□□□ 0.45
CNOT3O75175 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.86■□□□□ 0.45
CNOT3O75175 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC17.86■□□□□ 0.45
CNOT3O75175 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.86■□□□□ 0.45
CNOT3O75175 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.86■□□□□ 0.45
CNOT3O75175 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.86■□□□□ 0.45
CNOT3O75175 AL441883.1-201ENST00000566170 1045 ntBASIC17.86■□□□□ 0.45
CNOT3O75175 AC087388.1-201ENST00000571370 1112 ntBASIC17.86■□□□□ 0.45
CNOT3O75175 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.86■□□□□ 0.45
CNOT3O75175 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
CNOT3O75175 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.86■□□□□ 0.45
CNOT3O75175 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.86■□□□□ 0.45
CNOT3O75175 MYC-208ENST00000641036 567 ntBASIC17.86■□□□□ 0.45
CNOT3O75175 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
CNOT3O75175 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC17.86■□□□□ 0.45
CNOT3O75175 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.86■□□□□ 0.45
CNOT3O75175 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CNOT3O75175 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CNOT3O75175 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.85■□□□□ 0.45
CNOT3O75175 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CNOT3O75175 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.85■□□□□ 0.45
CNOT3O75175 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.85■□□□□ 0.45
CNOT3O75175 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.85■□□□□ 0.45
CNOT3O75175 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.85■□□□□ 0.45
CNOT3O75175 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CNOT3O75175 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
CNOT3O75175 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.84■□□□□ 0.45
CNOT3O75175 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CNOT3O75175 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CNOT3O75175 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.84■□□□□ 0.45
CNOT3O75175 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.84■□□□□ 0.45
CNOT3O75175 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.84■□□□□ 0.45
CNOT3O75175 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.84■□□□□ 0.45
CNOT3O75175 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
CNOT3O75175 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CNOT3O75175 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CNOT3O75175 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.84■□□□□ 0.45
CNOT3O75175 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CNOT3O75175 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
CNOT3O75175 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.84■□□□□ 0.45
CNOT3O75175 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CNOT3O75175 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.83■□□□□ 0.45
CNOT3O75175 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
CNOT3O75175 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CNOT3O75175 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
CNOT3O75175 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.83■□□□□ 0.44
CNOT3O75175 AL512604.3-201ENST00000569583 964 ntBASIC17.83■□□□□ 0.44
CNOT3O75175 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.83■□□□□ 0.44
CNOT3O75175 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.83■□□□□ 0.44
CNOT3O75175 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT3O75175 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT3O75175 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT3O75175 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CNOT3O75175 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
CNOT3O75175 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT3O75175 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CNOT3O75175 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms