Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 SDCCAG3P1-201ENST00000589292 1150 ntBASIC25.83■■□□□ 1.73
NPHP4O75161 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC25.83■■□□□ 1.73
NPHP4O75161 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
NPHP4O75161 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
NPHP4O75161 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
NPHP4O75161 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.72
NPHP4O75161 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
NPHP4O75161 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC25.82■■□□□ 1.72
NPHP4O75161 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NPHP4O75161 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC25.82■■□□□ 1.72
NPHP4O75161 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
NPHP4O75161 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
NPHP4O75161 AC005593.1-201ENST00000624894 515 ntBASIC25.82■■□□□ 1.72
NPHP4O75161 PGM5P2-202ENST00000637225 1043 ntBASIC25.82■■□□□ 1.72
NPHP4O75161 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
NPHP4O75161 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC25.82■■□□□ 1.72
NPHP4O75161 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
NPHP4O75161 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
NPHP4O75161 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPHP4O75161 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC25.81■■□□□ 1.72
NPHP4O75161 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPHP4O75161 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPHP4O75161 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC25.81■■□□□ 1.72
NPHP4O75161 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC25.81■■□□□ 1.72
NPHP4O75161 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC25.81■■□□□ 1.72
NPHP4O75161 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC25.81■■□□□ 1.72
NPHP4O75161 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC25.81■■□□□ 1.72
NPHP4O75161 PRR29-209ENST00000582540 967 ntTSL 2 BASIC25.81■■□□□ 1.72
NPHP4O75161 AL078644.1-201ENST00000609881 752 ntBASIC25.81■■□□□ 1.72
NPHP4O75161 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPHP4O75161 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC25.81■■□□□ 1.72
NPHP4O75161 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC25.81■■□□□ 1.72
NPHP4O75161 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC25.81■■□□□ 1.72
NPHP4O75161 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC25.81■■□□□ 1.72
NPHP4O75161 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPHP4O75161 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPHP4O75161 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
NPHP4O75161 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC25.8■■□□□ 1.72
NPHP4O75161 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
NPHP4O75161 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC25.8■■□□□ 1.72
NPHP4O75161 MKNK2P1-201ENST00000437526 628 ntBASIC25.8■■□□□ 1.72
NPHP4O75161 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC25.8■■□□□ 1.72
NPHP4O75161 BX005266.1-201ENST00000473402 457 ntBASIC25.8■■□□□ 1.72
NPHP4O75161 AC006557.2-201ENST00000592985 1240 ntBASIC25.8■■□□□ 1.72
NPHP4O75161 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 AC097374.2-201ENST00000618617 1306 ntBASIC25.8■■□□□ 1.72
NPHP4O75161 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 LBX2-AS1-202ENST00000603175 2083 ntBASIC25.8■■□□□ 1.72
NPHP4O75161 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 ELL2P1-201ENST00000413990 1906 ntBASIC25.8■■□□□ 1.72
NPHP4O75161 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC25.8■■□□□ 1.72
NPHP4O75161 AL096865.1-201ENST00000606796 927 ntBASIC25.8■■□□□ 1.72
NPHP4O75161 AC093028.1-201ENST00000622998 982 ntBASIC25.8■■□□□ 1.72
NPHP4O75161 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
NPHP4O75161 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
NPHP4O75161 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
NPHP4O75161 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC25.79■■□□□ 1.72
NPHP4O75161 UROS-202ENST00000368778 1556 ntTSL 2 BASIC25.79■■□□□ 1.72
NPHP4O75161 AC079776.2-201ENST00000641154 1609 ntBASIC25.79■■□□□ 1.72
NPHP4O75161 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
NPHP4O75161 SRP19-202ENST00000445150 833 ntTSL 2 BASIC25.79■■□□□ 1.72
NPHP4O75161 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC25.79■■□□□ 1.72
NPHP4O75161 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC25.79■■□□□ 1.72
NPHP4O75161 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHP4O75161 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHP4O75161 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC25.78■■□□□ 1.72
NPHP4O75161 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHP4O75161 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHP4O75161 ASL-204ENST00000395331 1538 ntTSL 5 BASIC25.78■■□□□ 1.72
NPHP4O75161 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHP4O75161 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
NPHP4O75161 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC25.78■■□□□ 1.72
NPHP4O75161 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC25.78■■□□□ 1.72
NPHP4O75161 AC136632.2-201ENST00000512891 861 ntBASIC25.78■■□□□ 1.72
NPHP4O75161 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC25.78■■□□□ 1.72
NPHP4O75161 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC25.78■■□□□ 1.72
NPHP4O75161 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC25.78■■□□□ 1.72
NPHP4O75161 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC25.78■■□□□ 1.72
NPHP4O75161 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHP4O75161 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
NPHP4O75161 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NPHP4O75161 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
NPHP4O75161 MTMR9LP-203ENST00000426597 1545 ntBASIC25.77■■□□□ 1.72
NPHP4O75161 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC25.77■■□□□ 1.72
NPHP4O75161 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC25.77■■□□□ 1.72
NPHP4O75161 HLA-J-202ENST00000469281 1241 ntBASIC25.77■■□□□ 1.72
NPHP4O75161 AL022326.1-202ENST00000641533 845 ntBASIC25.77■■□□□ 1.72
NPHP4O75161 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC25.77■■□□□ 1.72
NPHP4O75161 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
NPHP4O75161 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
NPHP4O75161 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
NPHP4O75161 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC25.76■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms