Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC004951.3-201ENST00000418645 1148 ntBASIC19.86■□□□□ 0.77
RNF40O75150 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RNF40O75150 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
RNF40O75150 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF40O75150 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
RNF40O75150 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RNF40O75150 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RNF40O75150 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF40O75150 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC19.86■□□□□ 0.77
RNF40O75150 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF40O75150 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF40O75150 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
RNF40O75150 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF40O75150 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RNF40O75150 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF40O75150 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF40O75150 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF40O75150 AC009053.2-201ENST00000563701 2365 ntBASIC19.85■□□□□ 0.77
RNF40O75150 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF40O75150 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.85■□□□□ 0.77
RNF40O75150 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF40O75150 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
RNF40O75150 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF40O75150 HMGA1P5-201ENST00000412453 271 ntBASIC19.85■□□□□ 0.77
RNF40O75150 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF40O75150 MFAP1P1-201ENST00000442257 1255 ntBASIC19.85■□□□□ 0.77
RNF40O75150 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF40O75150 AC022616.7-201ENST00000525383 220 ntBASIC19.85■□□□□ 0.77
RNF40O75150 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
RNF40O75150 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF40O75150 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF40O75150 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RNF40O75150 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.85■□□□□ 0.77
RNF40O75150 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF40O75150 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF40O75150 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF40O75150 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RNF40O75150 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF40O75150 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RNF40O75150 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.85■□□□□ 0.77
RNF40O75150 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC19.85■□□□□ 0.77
RNF40O75150 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RNF40O75150 PXK-206ENST00000463280 2825 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF40O75150 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RNF40O75150 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF40O75150 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 FAM207BP-201ENST00000447172 505 ntBASIC19.84■□□□□ 0.77
RNF40O75150 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF40O75150 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF40O75150 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF40O75150 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF40O75150 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
RNF40O75150 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.84■□□□□ 0.77
RNF40O75150 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF40O75150 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.84■□□□□ 0.77
RNF40O75150 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RNF40O75150 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
RNF40O75150 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF40O75150 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 FST-202ENST00000396947 2538 ntTSL 5 BASIC19.84■□□□□ 0.77
RNF40O75150 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RNF40O75150 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.84■□□□□ 0.77
RNF40O75150 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RNF40O75150 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF40O75150 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF40O75150 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF40O75150 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF40O75150 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RNF40O75150 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF40O75150 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF40O75150 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.83■□□□□ 0.77
RNF40O75150 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RNF40O75150 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.83■□□□□ 0.77
RNF40O75150 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF40O75150 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF40O75150 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF40O75150 AC117947.1-201ENST00000427448 529 ntBASIC19.83■□□□□ 0.77
RNF40O75150 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF40O75150 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.83■□□□□ 0.77
RNF40O75150 AC063952.2-201ENST00000498792 1227 ntBASIC19.83■□□□□ 0.77
RNF40O75150 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.83■□□□□ 0.77
RNF40O75150 LINC01238-205ENST00000567549 1107 ntBASIC19.83■□□□□ 0.77
RNF40O75150 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RNF40O75150 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.77
RNF40O75150 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
RNF40O75150 AC116562.4-202ENST00000641738 218 ntBASIC19.83■□□□□ 0.77
RNF40O75150 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
RNF40O75150 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
RNF40O75150 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.83■□□□□ 0.76
RNF40O75150 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms