Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 VENTXP5-201ENST00000523979 775 ntBASIC17.28■□□□□ 0.36
PRAMEF2O60811 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 AC112497.1-201ENST00000624824 639 ntBASIC17.28■□□□□ 0.36
PRAMEF2O60811 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.28■□□□□ 0.36
PRAMEF2O60811 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 AL499627.1-201ENST00000569373 2188 ntBASIC17.28■□□□□ 0.36
PRAMEF2O60811 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRAMEF2O60811 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF2O60811 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF2O60811 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF2O60811 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF2O60811 AC005332.1-201ENST00000577698 1310 ntBASIC17.27■□□□□ 0.36
PRAMEF2O60811 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF2O60811 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF2O60811 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.27■□□□□ 0.36
PRAMEF2O60811 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.27■□□□□ 0.36
PRAMEF2O60811 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRAMEF2O60811 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF2O60811 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF2O60811 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.27■□□□□ 0.35
PRAMEF2O60811 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF2O60811 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF2O60811 MYLKP1-201ENST00000509077 1580 ntBASIC17.27■□□□□ 0.35
PRAMEF2O60811 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
PRAMEF2O60811 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF2O60811 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF2O60811 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
PRAMEF2O60811 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 ZNF444P1-201ENST00000559497 298 ntBASIC17.26■□□□□ 0.35
PRAMEF2O60811 AL136038.3-201ENST00000561909 1096 ntBASIC17.26■□□□□ 0.35
PRAMEF2O60811 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
PRAMEF2O60811 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
PRAMEF2O60811 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF2O60811 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
PRAMEF2O60811 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.25■□□□□ 0.35
PRAMEF2O60811 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms