Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
KDELR3O43731 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.66■□□□□ 0.58
KDELR3O43731 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.65■□□□□ 0.58
KDELR3O43731 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.65■□□□□ 0.58
KDELR3O43731 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.65■□□□□ 0.58
KDELR3O43731 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.65■□□□□ 0.58
KDELR3O43731 KRT89P-201ENST00000620027 1478 ntBASIC18.65■□□□□ 0.58
KDELR3O43731 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 AL162741.1-201ENST00000565563 1558 ntBASIC18.65■□□□□ 0.58
KDELR3O43731 LINC01126-201ENST00000623515 1646 ntBASIC18.65■□□□□ 0.58
KDELR3O43731 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
KDELR3O43731 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.65■□□□□ 0.58
KDELR3O43731 PCED1CP-201ENST00000419887 785 ntBASIC18.65■□□□□ 0.58
KDELR3O43731 AL645929.1-201ENST00000420084 975 ntBASIC18.65■□□□□ 0.58
KDELR3O43731 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 KRT18P48-201ENST00000434763 852 ntBASIC18.65■□□□□ 0.58
KDELR3O43731 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.65■□□□□ 0.58
KDELR3O43731 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.65■□□□□ 0.58
KDELR3O43731 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.65■□□□□ 0.58
KDELR3O43731 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC18.65■□□□□ 0.58
KDELR3O43731 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
KDELR3O43731 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
KDELR3O43731 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.65■□□□□ 0.58
KDELR3O43731 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.65■□□□□ 0.58
KDELR3O43731 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.65■□□□□ 0.58
KDELR3O43731 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
KDELR3O43731 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.65■□□□□ 0.58
KDELR3O43731 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KDELR3O43731 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.64■□□□□ 0.58
KDELR3O43731 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
KDELR3O43731 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.64■□□□□ 0.58
KDELR3O43731 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.64■□□□□ 0.57
KDELR3O43731 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.64■□□□□ 0.57
KDELR3O43731 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.64■□□□□ 0.57
KDELR3O43731 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.64■□□□□ 0.57
KDELR3O43731 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
KDELR3O43731 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.64■□□□□ 0.57
KDELR3O43731 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.64■□□□□ 0.57
KDELR3O43731 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.64■□□□□ 0.57
KDELR3O43731 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.64■□□□□ 0.57
KDELR3O43731 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.64■□□□□ 0.57
KDELR3O43731 AC008687.5-201ENST00000593746 558 ntBASIC18.64■□□□□ 0.57
KDELR3O43731 AC116407.4-201ENST00000623319 1061 ntBASIC18.64■□□□□ 0.57
KDELR3O43731 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 AL358472.4-201ENST00000633140 710 ntBASIC18.64■□□□□ 0.57
KDELR3O43731 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.64■□□□□ 0.57
KDELR3O43731 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.64■□□□□ 0.57
KDELR3O43731 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KDELR3O43731 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.63■□□□□ 0.57
KDELR3O43731 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.63■□□□□ 0.57
KDELR3O43731 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
KDELR3O43731 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.63■□□□□ 0.57
KDELR3O43731 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.63■□□□□ 0.57
KDELR3O43731 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.63■□□□□ 0.57
KDELR3O43731 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.63■□□□□ 0.57
KDELR3O43731 AC090164.3-201ENST00000610780 2143 ntBASIC18.63■□□□□ 0.57
KDELR3O43731 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.63■□□□□ 0.57
KDELR3O43731 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.63■□□□□ 0.57
KDELR3O43731 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.63■□□□□ 0.57
KDELR3O43731 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
KDELR3O43731 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
KDELR3O43731 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KDELR3O43731 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms