Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA1O15239 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
NDUFA1O15239 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA1O15239 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA1O15239 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA1O15239 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA1O15239 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA1O15239 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA1O15239 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC12.62□□□□□ -0.39
NDUFA1O15239 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC12.62□□□□□ -0.39
NDUFA1O15239 AL109923.1-201ENST00000618799 583 ntBASIC12.62□□□□□ -0.39
NDUFA1O15239 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
NDUFA1O15239 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFA1O15239 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC12.62□□□□□ -0.39
NDUFA1O15239 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC12.62□□□□□ -0.39
NDUFA1O15239 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
NDUFA1O15239 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
NDUFA1O15239 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
NDUFA1O15239 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
NDUFA1O15239 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NDUFA1O15239 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC12.61□□□□□ -0.39
NDUFA1O15239 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 AC124067.4-201ENST00000519691 2379 ntBASIC12.61□□□□□ -0.39
NDUFA1O15239 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC12.61□□□□□ -0.39
NDUFA1O15239 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFA1O15239 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 AC069152.1-201ENST00000438030 544 ntBASIC12.61□□□□□ -0.39
NDUFA1O15239 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC12.61□□□□□ -0.39
NDUFA1O15239 RHOD-202ENST00000532559 538 ntTSL 3 BASIC12.61□□□□□ -0.39
NDUFA1O15239 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.61□□□□□ -0.39
NDUFA1O15239 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.61□□□□□ -0.39
NDUFA1O15239 AC083880.1-201ENST00000608266 535 ntBASIC12.61□□□□□ -0.39
NDUFA1O15239 AC004264.1-201ENST00000608354 794 ntBASIC12.61□□□□□ -0.39
NDUFA1O15239 GXYLT1P5-201ENST00000614548 1189 ntBASIC12.61□□□□□ -0.39
NDUFA1O15239 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
NDUFA1O15239 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 AL645608.8-201ENST00000606034 2086 ntBASIC12.61□□□□□ -0.39
NDUFA1O15239 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
NDUFA1O15239 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFA1O15239 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFA1O15239 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC12.61□□□□□ -0.39
NDUFA1O15239 PCDHA12-202ENST00000613593 2588 ntBASIC12.61□□□□□ -0.39
NDUFA1O15239 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
NDUFA1O15239 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
NDUFA1O15239 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
NDUFA1O15239 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
NDUFA1O15239 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms