Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN4O14493 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN4O14493 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.35■□□□□ 0.37
CLDN4O14493 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN4O14493 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLDN4O14493 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 OR6D1P-202ENST00000641007 5290 ntBASIC17.35■□□□□ 0.37
CLDN4O14493 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.35■□□□□ 0.37
CLDN4O14493 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLDN4O14493 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLDN4O14493 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN4O14493 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLDN4O14493 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN4O14493 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN4O14493 MIR149-201ENST00000384879 89 ntBASIC17.34■□□□□ 0.37
CLDN4O14493 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
CLDN4O14493 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CLDN4O14493 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.34■□□□□ 0.37
CLDN4O14493 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.34■□□□□ 0.37
CLDN4O14493 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN4O14493 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.34■□□□□ 0.37
CLDN4O14493 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 AL359075.1-203ENST00000462729 1002 ntBASIC17.34■□□□□ 0.37
CLDN4O14493 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.34■□□□□ 0.37
CLDN4O14493 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CLDN4O14493 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CLDN4O14493 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN4O14493 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN4O14493 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CLDN4O14493 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.37
CLDN4O14493 AL138781.2-201ENST00000617896 1843 ntBASIC17.33■□□□□ 0.37
CLDN4O14493 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN4O14493 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN4O14493 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
CLDN4O14493 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CLDN4O14493 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.33■□□□□ 0.37
CLDN4O14493 AC009102.3-201ENST00000623118 1491 ntBASIC17.33■□□□□ 0.37
CLDN4O14493 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN4O14493 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN4O14493 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN4O14493 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN4O14493 AL157888.1-201ENST00000631930 593 ntBASIC17.33■□□□□ 0.36
CLDN4O14493 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.33■□□□□ 0.36
CLDN4O14493 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN4O14493 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN4O14493 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN4O14493 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN4O14493 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CLDN4O14493 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.33■□□□□ 0.36
CLDN4O14493 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN4O14493 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
CLDN4O14493 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CLDN4O14493 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.32■□□□□ 0.36
CLDN4O14493 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.32■□□□□ 0.36
CLDN4O14493 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CLDN4O14493 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.32■□□□□ 0.36
CLDN4O14493 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.32■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms