Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
TRIM38O00635 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.53■□□□□ 0.56
TRIM38O00635 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM38O00635 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM38O00635 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TRIM38O00635 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM38O00635 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
TRIM38O00635 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRIM38O00635 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.53■□□□□ 0.56
TRIM38O00635 CLEC4GP1-201ENST00000596555 870 ntBASIC18.53■□□□□ 0.56
TRIM38O00635 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM38O00635 CR769767.2-201ENST00000622735 460 ntBASIC18.53■□□□□ 0.56
TRIM38O00635 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM38O00635 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
TRIM38O00635 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
TRIM38O00635 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM38O00635 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
TRIM38O00635 Z98044.1-201ENST00000632503 1764 ntBASIC18.53■□□□□ 0.56
TRIM38O00635 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM38O00635 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRIM38O00635 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM38O00635 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM38O00635 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM38O00635 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM38O00635 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM38O00635 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM38O00635 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.56
TRIM38O00635 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM38O00635 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.52■□□□□ 0.55
TRIM38O00635 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM38O00635 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.52■□□□□ 0.55
TRIM38O00635 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM38O00635 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
TRIM38O00635 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM38O00635 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRIM38O00635 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM38O00635 PCDHB18P-201ENST00000524813 2368 ntBASIC18.52■□□□□ 0.55
TRIM38O00635 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM38O00635 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
TRIM38O00635 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM38O00635 BICD1-207ENST00000551848 1962 ntBASIC18.51■□□□□ 0.55
TRIM38O00635 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.51■□□□□ 0.55
TRIM38O00635 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM38O00635 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM38O00635 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRIM38O00635 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM38O00635 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRIM38O00635 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
TRIM38O00635 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM38O00635 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM38O00635 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.51■□□□□ 0.55
TRIM38O00635 AL354751.1-201ENST00000412768 1863 ntBASIC18.51■□□□□ 0.55
TRIM38O00635 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM38O00635 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM38O00635 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms