Protein–RNA interactions for Protein: O00555

CACNA1A, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, humanhuman

Predictions only

Length 2,505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1AO00555 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CACNA1AO00555 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1AO00555 SIGLEC16-201ENST00000599858 1437 ntBASIC17.25■□□□□ 0.35
CACNA1AO00555 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CACNA1AO00555 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1AO00555 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1AO00555 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.24■□□□□ 0.35
CACNA1AO00555 CRYGEP-201ENST00000412192 528 ntBASIC17.24■□□□□ 0.35
CACNA1AO00555 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.24■□□□□ 0.35
CACNA1AO00555 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1AO00555 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1AO00555 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1AO00555 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1AO00555 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1AO00555 ZNF815P-204ENST00000434898 1737 ntBASIC17.24■□□□□ 0.35
CACNA1AO00555 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1AO00555 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.24■□□□□ 0.35
CACNA1AO00555 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1AO00555 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1AO00555 IGLL3P-201ENST00000412472 434 ntBASIC17.24■□□□□ 0.35
CACNA1AO00555 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC17.24■□□□□ 0.35
CACNA1AO00555 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1AO00555 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.24■□□□□ 0.35
CACNA1AO00555 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.24■□□□□ 0.35
CACNA1AO00555 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1AO00555 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1AO00555 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1AO00555 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1AO00555 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1AO00555 AC091812.2-201ENST00000619081 385 ntBASIC17.24■□□□□ 0.35
CACNA1AO00555 AC009093.7-201ENST00000623853 1223 ntBASIC17.24■□□□□ 0.35
CACNA1AO00555 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1AO00555 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1AO00555 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.24■□□□□ 0.35
CACNA1AO00555 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
CACNA1AO00555 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.24■□□□□ 0.35
CACNA1AO00555 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1AO00555 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CACNA1AO00555 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.23■□□□□ 0.35
CACNA1AO00555 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1AO00555 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1AO00555 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1AO00555 GOLGA6L11P-201ENST00000417252 1298 ntBASIC17.23■□□□□ 0.35
CACNA1AO00555 GPR53P-205ENST00000457298 1084 ntBASIC17.23■□□□□ 0.35
CACNA1AO00555 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC17.23■□□□□ 0.35
CACNA1AO00555 HILS1-202ENST00000545329 423 ntBASIC17.23■□□□□ 0.35
CACNA1AO00555 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1AO00555 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
CACNA1AO00555 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.23■□□□□ 0.35
CACNA1AO00555 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
CACNA1AO00555 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.23■□□□□ 0.35
CACNA1AO00555 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.23■□□□□ 0.35
CACNA1AO00555 AL121761.2-201ENST00000598007 1648 ntBASIC17.23■□□□□ 0.35
CACNA1AO00555 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1AO00555 AC129492.6-201ENST00000611383 1305 ntBASIC17.23■□□□□ 0.35
CACNA1AO00555 MIR1909-201ENST00000411312 80 ntBASIC17.23■□□□□ 0.35
CACNA1AO00555 BASP1P1-201ENST00000430708 665 ntBASIC17.23■□□□□ 0.35
CACNA1AO00555 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC17.23■□□□□ 0.35
CACNA1AO00555 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC17.23■□□□□ 0.35
CACNA1AO00555 MIR4525-201ENST00000580000 75 ntBASIC17.23■□□□□ 0.35
CACNA1AO00555 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1AO00555 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CACNA1AO00555 AL512353.2-201ENST00000448759 1962 ntBASIC17.23■□□□□ 0.35
CACNA1AO00555 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC17.23■□□□□ 0.35
CACNA1AO00555 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 AL662799.1-202ENST00000614205 422 ntBASIC17.22■□□□□ 0.35
CACNA1AO00555 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
CACNA1AO00555 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
CACNA1AO00555 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
CACNA1AO00555 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 RCC2P3-201ENST00000418112 1537 ntBASIC17.22■□□□□ 0.35
CACNA1AO00555 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.22■□□□□ 0.35
CACNA1AO00555 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 AL627223.1-201ENST00000416693 442 ntBASIC17.22■□□□□ 0.35
CACNA1AO00555 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.22■□□□□ 0.35
CACNA1AO00555 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC17.22■□□□□ 0.35
CACNA1AO00555 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
CACNA1AO00555 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.22■□□□□ 0.35
CACNA1AO00555 CU639417.3-201ENST00000624240 1404 ntBASIC17.22■□□□□ 0.35
CACNA1AO00555 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
CACNA1AO00555 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.22■□□□□ 0.35
CACNA1AO00555 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1AO00555 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.21■□□□□ 0.35
CACNA1AO00555 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1AO00555 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CACNA1AO00555 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNA1AO00555 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC17.21■□□□□ 0.35
CACNA1AO00555 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.21■□□□□ 0.35
CACNA1AO00555 CIPC-205ENST00000555437 566 ntTSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms