Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXN3O00409 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXN3O00409 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXN3O00409 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXN3O00409 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXN3O00409 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXN3O00409 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.72■□□□□ 0.75
FOXN3O00409 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC19.72■□□□□ 0.75
FOXN3O00409 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXN3O00409 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC19.72■□□□□ 0.75
FOXN3O00409 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXN3O00409 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXN3O00409 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 NOC2LP2-201ENST00000407594 1944 ntBASIC19.72■□□□□ 0.75
FOXN3O00409 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.72■□□□□ 0.75
FOXN3O00409 AC009102.3-201ENST00000623118 1491 ntBASIC19.72■□□□□ 0.75
FOXN3O00409 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
FOXN3O00409 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
FOXN3O00409 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.72■□□□□ 0.75
FOXN3O00409 REXO1L9P-201ENST00000604264 2108 ntBASIC19.72■□□□□ 0.75
FOXN3O00409 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXN3O00409 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXN3O00409 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
FOXN3O00409 LINC01568-207ENST00000641790 1380 ntBASIC19.71■□□□□ 0.75
FOXN3O00409 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXN3O00409 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN3O00409 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXN3O00409 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
FOXN3O00409 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN3O00409 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN3O00409 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN3O00409 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXN3O00409 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
FOXN3O00409 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
FOXN3O00409 MIR149-201ENST00000384879 89 ntBASIC19.71■□□□□ 0.75
FOXN3O00409 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.71■□□□□ 0.75
FOXN3O00409 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.71■□□□□ 0.75
FOXN3O00409 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXN3O00409 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC19.71■□□□□ 0.75
FOXN3O00409 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN3O00409 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN3O00409 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN3O00409 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN3O00409 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
FOXN3O00409 AC068880.1-201ENST00000507289 2297 ntBASIC19.71■□□□□ 0.75
FOXN3O00409 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
FOXN3O00409 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.7■□□□□ 0.74
FOXN3O00409 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXN3O00409 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.7■□□□□ 0.74
FOXN3O00409 PHGDH-209ENST00000641074 1780 ntBASIC19.7■□□□□ 0.74
FOXN3O00409 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXN3O00409 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
FOXN3O00409 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
FOXN3O00409 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXN3O00409 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXN3O00409 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.7■□□□□ 0.74
FOXN3O00409 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
FOXN3O00409 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.7■□□□□ 0.74
FOXN3O00409 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
FOXN3O00409 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
FOXN3O00409 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FOXN3O00409 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXN3O00409 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXN3O00409 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
FOXN3O00409 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN3O00409 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN3O00409 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN3O00409 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN3O00409 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN3O00409 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
FOXN3O00409 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN3O00409 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC19.69■□□□□ 0.74
FOXN3O00409 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
FOXN3O00409 HMGA1P5-201ENST00000412453 271 ntBASIC19.69■□□□□ 0.74
FOXN3O00409 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC19.69■□□□□ 0.74
FOXN3O00409 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms