Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 AL512604.3-201ENST00000569583 964 ntBASIC18.62■□□□□ 0.57
AP3B1O00203 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.62■□□□□ 0.57
AP3B1O00203 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 AP000525.1-201ENST00000608286 694 ntBASIC18.62■□□□□ 0.57
AP3B1O00203 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.62■□□□□ 0.57
AP3B1O00203 CR769767.2-201ENST00000622735 460 ntBASIC18.62■□□□□ 0.57
AP3B1O00203 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3B1O00203 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.62■□□□□ 0.57
AP3B1O00203 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3B1O00203 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.62■□□□□ 0.57
AP3B1O00203 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
AP3B1O00203 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.61■□□□□ 0.57
AP3B1O00203 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3B1O00203 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.61■□□□□ 0.57
AP3B1O00203 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
AP3B1O00203 TSPY14P-201ENST00000303979 915 ntBASIC18.61■□□□□ 0.57
AP3B1O00203 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.61■□□□□ 0.57
AP3B1O00203 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 EGLN1P1-201ENST00000531623 762 ntBASIC18.61■□□□□ 0.57
AP3B1O00203 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.61■□□□□ 0.57
AP3B1O00203 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
AP3B1O00203 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3B1O00203 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.61■□□□□ 0.57
AP3B1O00203 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
AP3B1O00203 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
AP3B1O00203 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.61■□□□□ 0.57
AP3B1O00203 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
AP3B1O00203 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.6■□□□□ 0.57
AP3B1O00203 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
AP3B1O00203 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
AP3B1O00203 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC18.6■□□□□ 0.57
AP3B1O00203 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 PRR31-201ENST00000371629 978 ntTSL 2 BASIC18.6■□□□□ 0.57
AP3B1O00203 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
AP3B1O00203 MIR1238-201ENST00000408483 83 ntBASIC18.6■□□□□ 0.57
AP3B1O00203 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
AP3B1O00203 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.6■□□□□ 0.57
AP3B1O00203 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.6■□□□□ 0.57
AP3B1O00203 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.6■□□□□ 0.57
AP3B1O00203 AC007663.1-201ENST00000438948 1240 ntBASIC18.6■□□□□ 0.57
AP3B1O00203 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
AP3B1O00203 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.6■□□□□ 0.57
AP3B1O00203 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.6■□□□□ 0.57
AP3B1O00203 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC18.6■□□□□ 0.57
AP3B1O00203 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
AP3B1O00203 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.6■□□□□ 0.57
AP3B1O00203 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
AP3B1O00203 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
AP3B1O00203 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
AP3B1O00203 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
AP3B1O00203 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
AP3B1O00203 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.59■□□□□ 0.57
AP3B1O00203 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
AP3B1O00203 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
AP3B1O00203 FLJ13224-201ENST00000313737 1514 ntBASIC18.59■□□□□ 0.57
AP3B1O00203 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms