Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 CD70-202ENST00000423145 881 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC117947.1-201ENST00000427448 529 ntBASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AP003041.3-201ENST00000527151 707 ntBASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AL031432.5-201ENST00000641059 760 ntBASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC14.83□□□□□ -0.03
TCRBV4S1A1TA0A5B7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 COPE-203ENST00000351079 907 ntTSL 2 BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ANKRD20A18P-201ENST00000359341 492 ntBASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC022616.7-201ENST00000525383 220 ntBASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TCRBV4S1A1TA0A5B7 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 TSPY5P-201ENST00000426936 936 ntBASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 YBX1P2-201ENST00000489612 999 ntBASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC063952.2-201ENST00000498792 1227 ntBASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
TCRBV4S1A1TA0A5B7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms