Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATP13A1Q9HD20 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ATP13A1Q9HD20 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
ATP13A1Q9HD20 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ATP13A1Q9HD20 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ATP13A1Q9HD20 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ATP13A1Q9HD20 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
ATP13A1Q9HD20 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.64■■□□□ 1.7
ATP13A1Q9HD20 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
ATP13A1Q9HD20 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ATP13A1Q9HD20 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ATP13A1Q9HD20 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
ATP13A1Q9HD20 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
ATP13A1Q9HD20 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.63■■□□□ 1.69
ATP13A1Q9HD20 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.63■■□□□ 1.69
ATP13A1Q9HD20 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
ATP13A1Q9HD20 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
ATP13A1Q9HD20 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ATP13A1Q9HD20 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ATP13A1Q9HD20 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
ATP13A1Q9HD20 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
ATP13A1Q9HD20 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.6■■□□□ 1.69
ATP13A1Q9HD20 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ATP13A1Q9HD20 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ATP13A1Q9HD20 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ATP13A1Q9HD20 BX255925.1-201ENST00000566954 1854 ntBASIC25.6■■□□□ 1.69
ATP13A1Q9HD20 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC25.59■■□□□ 1.69
ATP13A1Q9HD20 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ATP13A1Q9HD20 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
ATP13A1Q9HD20 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC25.59■■□□□ 1.69
ATP13A1Q9HD20 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATP13A1Q9HD20 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.58■■□□□ 1.69
ATP13A1Q9HD20 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATP13A1Q9HD20 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.58■■□□□ 1.69
ATP13A1Q9HD20 LINC01003-201ENST00000564834 1764 ntBASIC25.58■■□□□ 1.69
ATP13A1Q9HD20 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC25.58■■□□□ 1.69
ATP13A1Q9HD20 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ATP13A1Q9HD20 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP13A1Q9HD20 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
ATP13A1Q9HD20 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
ATP13A1Q9HD20 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC25.57■■□□□ 1.68
ATP13A1Q9HD20 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.57■■□□□ 1.68
ATP13A1Q9HD20 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
ATP13A1Q9HD20 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
ATP13A1Q9HD20 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATP13A1Q9HD20 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.56■■□□□ 1.68
ATP13A1Q9HD20 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC25.56■■□□□ 1.68
ATP13A1Q9HD20 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.56■■□□□ 1.68
ATP13A1Q9HD20 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATP13A1Q9HD20 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATP13A1Q9HD20 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
ATP13A1Q9HD20 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
ATP13A1Q9HD20 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.54■■□□□ 1.68
ATP13A1Q9HD20 GPX1-201ENST00000419349 1106 ntBASIC25.54■■□□□ 1.68
ATP13A1Q9HD20 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ATP13A1Q9HD20 HSD17B1P1-201ENST00000590052 955 ntBASIC25.54■■□□□ 1.68
ATP13A1Q9HD20 AC022413.1-201ENST00000624602 984 ntBASIC25.54■■□□□ 1.68
ATP13A1Q9HD20 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATP13A1Q9HD20 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATP13A1Q9HD20 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.53■■□□□ 1.68
ATP13A1Q9HD20 AC126177.7-201ENST00000547904 679 ntBASIC25.53■■□□□ 1.68
ATP13A1Q9HD20 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.53■■□□□ 1.68
ATP13A1Q9HD20 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ATP13A1Q9HD20 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.53■■□□□ 1.68
ATP13A1Q9HD20 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ATP13A1Q9HD20 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.52■■□□□ 1.68
ATP13A1Q9HD20 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.52■■□□□ 1.68
ATP13A1Q9HD20 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
ATP13A1Q9HD20 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATP13A1Q9HD20 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATP13A1Q9HD20 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC25.51■■□□□ 1.67
ATP13A1Q9HD20 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATP13A1Q9HD20 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
ATP13A1Q9HD20 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATP13A1Q9HD20 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATP13A1Q9HD20 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATP13A1Q9HD20 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATP13A1Q9HD20 AC060814.1-201ENST00000554326 538 ntBASIC25.5■■□□□ 1.67
ATP13A1Q9HD20 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATP13A1Q9HD20 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATP13A1Q9HD20 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.5■■□□□ 1.67
ATP13A1Q9HD20 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.49■■□□□ 1.67
ATP13A1Q9HD20 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ATP13A1Q9HD20 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.48■■□□□ 1.67
ATP13A1Q9HD20 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC25.48■■□□□ 1.67
ATP13A1Q9HD20 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP13A1Q9HD20 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.48■■□□□ 1.67
ATP13A1Q9HD20 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATP13A1Q9HD20 AL359258.2-201ENST00000564063 1566 ntBASIC25.48■■□□□ 1.67
ATP13A1Q9HD20 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ATP13A1Q9HD20 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.47■■□□□ 1.67
ATP13A1Q9HD20 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.47■■□□□ 1.67
ATP13A1Q9HD20 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATP13A1Q9HD20 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATP13A1Q9HD20 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC25.46■■□□□ 1.67
ATP13A1Q9HD20 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ATP13A1Q9HD20 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ATP13A1Q9HD20 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ATP13A1Q9HD20 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC25.45■■□□□ 1.66
ATP13A1Q9HD20 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms