Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NckipsdQ9ESJ4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NckipsdQ9ESJ4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.9■■□□□ 1.42
NckipsdQ9ESJ4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NckipsdQ9ESJ4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NckipsdQ9ESJ4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.9■■□□□ 1.42
NckipsdQ9ESJ4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
NckipsdQ9ESJ4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.89■■□□□ 1.41
NckipsdQ9ESJ4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.89■■□□□ 1.41
NckipsdQ9ESJ4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NckipsdQ9ESJ4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NckipsdQ9ESJ4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NckipsdQ9ESJ4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NckipsdQ9ESJ4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
NckipsdQ9ESJ4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.87■■□□□ 1.41
NckipsdQ9ESJ4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NckipsdQ9ESJ4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NckipsdQ9ESJ4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NckipsdQ9ESJ4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NckipsdQ9ESJ4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NckipsdQ9ESJ4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NckipsdQ9ESJ4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NckipsdQ9ESJ4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NckipsdQ9ESJ4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NckipsdQ9ESJ4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NckipsdQ9ESJ4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NckipsdQ9ESJ4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NckipsdQ9ESJ4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
NckipsdQ9ESJ4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
NckipsdQ9ESJ4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.81■■□□□ 1.4
NckipsdQ9ESJ4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NckipsdQ9ESJ4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NckipsdQ9ESJ4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NckipsdQ9ESJ4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
NckipsdQ9ESJ4 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.8■■□□□ 1.4
NckipsdQ9ESJ4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NckipsdQ9ESJ4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NckipsdQ9ESJ4 Gm10420-201ENSMUST00000121713 882 ntBASIC23.79■■□□□ 1.4
NckipsdQ9ESJ4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NckipsdQ9ESJ4 Gm44428-201ENSMUST00000204474 874 ntBASIC23.79■■□□□ 1.4
NckipsdQ9ESJ4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NckipsdQ9ESJ4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.78■■□□□ 1.4
NckipsdQ9ESJ4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.77■■□□□ 1.4
NckipsdQ9ESJ4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
NckipsdQ9ESJ4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NckipsdQ9ESJ4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NckipsdQ9ESJ4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NckipsdQ9ESJ4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NckipsdQ9ESJ4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NckipsdQ9ESJ4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NckipsdQ9ESJ4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NckipsdQ9ESJ4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NckipsdQ9ESJ4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.74■■□□□ 1.39
NckipsdQ9ESJ4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NckipsdQ9ESJ4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
NckipsdQ9ESJ4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.73■■□□□ 1.39
NckipsdQ9ESJ4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.73■■□□□ 1.39
NckipsdQ9ESJ4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
NckipsdQ9ESJ4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NckipsdQ9ESJ4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NckipsdQ9ESJ4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
NckipsdQ9ESJ4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NckipsdQ9ESJ4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
NckipsdQ9ESJ4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NckipsdQ9ESJ4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NckipsdQ9ESJ4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.7■■□□□ 1.39
NckipsdQ9ESJ4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
NckipsdQ9ESJ4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.7■■□□□ 1.38
NckipsdQ9ESJ4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NckipsdQ9ESJ4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NckipsdQ9ESJ4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
NckipsdQ9ESJ4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.7■■□□□ 1.38
NckipsdQ9ESJ4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NckipsdQ9ESJ4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
NckipsdQ9ESJ4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NckipsdQ9ESJ4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NckipsdQ9ESJ4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NckipsdQ9ESJ4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
NckipsdQ9ESJ4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NckipsdQ9ESJ4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NckipsdQ9ESJ4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NckipsdQ9ESJ4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NckipsdQ9ESJ4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.64■■□□□ 1.38
NckipsdQ9ESJ4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NckipsdQ9ESJ4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NckipsdQ9ESJ4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NckipsdQ9ESJ4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 10.4 ms