Protein–RNA interactions for Protein: Q9ESJ4

Nckipsd, NCK-interacting protein with SH3 domain, mousemouse

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NckipsdQ9ESJ4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NckipsdQ9ESJ4 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
NckipsdQ9ESJ4 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.9■■□□□ 1.42
NckipsdQ9ESJ4 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
NckipsdQ9ESJ4 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
NckipsdQ9ESJ4 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC23.9■■□□□ 1.42
NckipsdQ9ESJ4 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.9■■□□□ 1.42
NckipsdQ9ESJ4 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC23.89■■□□□ 1.41
NckipsdQ9ESJ4 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.89■■□□□ 1.41
NckipsdQ9ESJ4 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
NckipsdQ9ESJ4 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
NckipsdQ9ESJ4 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
NckipsdQ9ESJ4 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NckipsdQ9ESJ4 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
NckipsdQ9ESJ4 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC23.87■■□□□ 1.41
NckipsdQ9ESJ4 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
NckipsdQ9ESJ4 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
NckipsdQ9ESJ4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
NckipsdQ9ESJ4 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NckipsdQ9ESJ4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
NckipsdQ9ESJ4 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
NckipsdQ9ESJ4 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
NckipsdQ9ESJ4 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.83■■□□□ 1.41
NckipsdQ9ESJ4 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
NckipsdQ9ESJ4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NckipsdQ9ESJ4 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
NckipsdQ9ESJ4 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NckipsdQ9ESJ4 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
NckipsdQ9ESJ4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
NckipsdQ9ESJ4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
NckipsdQ9ESJ4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC23.81■■□□□ 1.4
NckipsdQ9ESJ4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NckipsdQ9ESJ4 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
NckipsdQ9ESJ4 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
NckipsdQ9ESJ4 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
NckipsdQ9ESJ4 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.8■■□□□ 1.4
NckipsdQ9ESJ4 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
NckipsdQ9ESJ4 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
NckipsdQ9ESJ4 Gm10420-201ENSMUST00000121713 882 ntBASIC23.79■■□□□ 1.4
NckipsdQ9ESJ4 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
NckipsdQ9ESJ4 Gm44428-201ENSMUST00000204474 874 ntBASIC23.79■■□□□ 1.4
NckipsdQ9ESJ4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
NckipsdQ9ESJ4 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.78■■□□□ 1.4
NckipsdQ9ESJ4 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.77■■□□□ 1.4
NckipsdQ9ESJ4 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
NckipsdQ9ESJ4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
NckipsdQ9ESJ4 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
NckipsdQ9ESJ4 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
NckipsdQ9ESJ4 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
NckipsdQ9ESJ4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
NckipsdQ9ESJ4 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NckipsdQ9ESJ4 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
NckipsdQ9ESJ4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NckipsdQ9ESJ4 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC23.74■■□□□ 1.39
NckipsdQ9ESJ4 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
NckipsdQ9ESJ4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
NckipsdQ9ESJ4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC23.73■■□□□ 1.39
NckipsdQ9ESJ4 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC23.73■■□□□ 1.39
NckipsdQ9ESJ4 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
NckipsdQ9ESJ4 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NckipsdQ9ESJ4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
NckipsdQ9ESJ4 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.71■■□□□ 1.39
NckipsdQ9ESJ4 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
NckipsdQ9ESJ4 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
NckipsdQ9ESJ4 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
NckipsdQ9ESJ4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
NckipsdQ9ESJ4 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC23.7■■□□□ 1.39
NckipsdQ9ESJ4 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
NckipsdQ9ESJ4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC23.7■■□□□ 1.38
NckipsdQ9ESJ4 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NckipsdQ9ESJ4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NckipsdQ9ESJ4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
NckipsdQ9ESJ4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC23.7■■□□□ 1.38
NckipsdQ9ESJ4 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NckipsdQ9ESJ4 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
NckipsdQ9ESJ4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
NckipsdQ9ESJ4 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
NckipsdQ9ESJ4 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NckipsdQ9ESJ4 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
NckipsdQ9ESJ4 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
NckipsdQ9ESJ4 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
NckipsdQ9ESJ4 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
NckipsdQ9ESJ4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
NckipsdQ9ESJ4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.65■■□□□ 1.38
NckipsdQ9ESJ4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.64■■□□□ 1.38
NckipsdQ9ESJ4 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
NckipsdQ9ESJ4 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
NckipsdQ9ESJ4 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
NckipsdQ9ESJ4 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.64■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 77.1 ms