Protein–RNA interactions for Protein: Q99N57

Raf1, RAF proto-oncogene serine/threonine-protein kinase, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Raf1Q99N57 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Raf1Q99N57 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Raf1Q99N57 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Raf1Q99N57 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Raf1Q99N57 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Raf1Q99N57 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Raf1Q99N57 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Raf1Q99N57 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raf1Q99N57 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Raf1Q99N57 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Raf1Q99N57 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Raf1Q99N57 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Raf1Q99N57 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Raf1Q99N57 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Raf1Q99N57 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Raf1Q99N57 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Raf1Q99N57 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Raf1Q99N57 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Raf1Q99N57 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Raf1Q99N57 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raf1Q99N57 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Raf1Q99N57 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
Raf1Q99N57 Gm30023-201ENSMUST00000197970 889 ntBASIC20.19■□□□□ 0.82
Raf1Q99N57 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
Raf1Q99N57 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Raf1Q99N57 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raf1Q99N57 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Raf1Q99N57 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Raf1Q99N57 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Raf1Q99N57 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Raf1Q99N57 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Raf1Q99N57 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Raf1Q99N57 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC20.17■□□□□ 0.82
Raf1Q99N57 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Raf1Q99N57 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Raf1Q99N57 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Raf1Q99N57 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Raf1Q99N57 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Raf1Q99N57 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Raf1Q99N57 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Raf1Q99N57 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Raf1Q99N57 Gm11599-201ENSMUST00000118720 878 ntBASIC20.15■□□□□ 0.82
Raf1Q99N57 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Raf1Q99N57 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Raf1Q99N57 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.15■□□□□ 0.82
Raf1Q99N57 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Raf1Q99N57 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Raf1Q99N57 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Raf1Q99N57 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.14■□□□□ 0.81
Raf1Q99N57 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Raf1Q99N57 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raf1Q99N57 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raf1Q99N57 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Raf1Q99N57 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Raf1Q99N57 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Raf1Q99N57 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC20.13■□□□□ 0.81
Raf1Q99N57 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.13■□□□□ 0.81
Raf1Q99N57 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Raf1Q99N57 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Raf1Q99N57 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Raf1Q99N57 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Raf1Q99N57 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Raf1Q99N57 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Raf1Q99N57 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Raf1Q99N57 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Raf1Q99N57 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raf1Q99N57 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raf1Q99N57 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Raf1Q99N57 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Raf1Q99N57 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.1■□□□□ 0.81
Raf1Q99N57 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Raf1Q99N57 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.1■□□□□ 0.81
Raf1Q99N57 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Raf1Q99N57 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.09■□□□□ 0.81
Raf1Q99N57 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Raf1Q99N57 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Raf1Q99N57 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Raf1Q99N57 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Raf1Q99N57 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Raf1Q99N57 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Raf1Q99N57 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Raf1Q99N57 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Raf1Q99N57 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Raf1Q99N57 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.07■□□□□ 0.8
Raf1Q99N57 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Raf1Q99N57 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Raf1Q99N57 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.07■□□□□ 0.8
Raf1Q99N57 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Raf1Q99N57 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Raf1Q99N57 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.06■□□□□ 0.8
Raf1Q99N57 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Raf1Q99N57 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raf1Q99N57 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC20.06■□□□□ 0.8
Raf1Q99N57 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raf1Q99N57 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raf1Q99N57 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raf1Q99N57 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Raf1Q99N57 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Raf1Q99N57 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.05■□□□□ 0.8
Raf1Q99N57 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 57.1 ms