Protein–RNA interactions for Protein: Q8VHP6

Cdhr1, Cadherin-related family member 1, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr1Q8VHP6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cdhr1Q8VHP6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Cdhr1Q8VHP6 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdhr1Q8VHP6 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cdhr1Q8VHP6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdhr1Q8VHP6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdhr1Q8VHP6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cdhr1Q8VHP6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Cdhr1Q8VHP6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC22.27■■□□□ 1.15
Cdhr1Q8VHP6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.26■■□□□ 1.15
Cdhr1Q8VHP6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cdhr1Q8VHP6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cdhr1Q8VHP6 Gm4419-202ENSMUST00000226239 1431 ntBASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Cdhr1Q8VHP6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cdhr1Q8VHP6 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cdhr1Q8VHP6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Cdhr1Q8VHP6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdhr1Q8VHP6 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cdhr1Q8VHP6 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdhr1Q8VHP6 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cdhr1Q8VHP6 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC22.21■■□□□ 1.15
Cdhr1Q8VHP6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cdhr1Q8VHP6 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cdhr1Q8VHP6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cdhr1Q8VHP6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cdhr1Q8VHP6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cdhr1Q8VHP6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.18■■□□□ 1.14
Cdhr1Q8VHP6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cdhr1Q8VHP6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cdhr1Q8VHP6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Cdhr1Q8VHP6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Cdhr1Q8VHP6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.16■■□□□ 1.14
Cdhr1Q8VHP6 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.16■■□□□ 1.14
Cdhr1Q8VHP6 Gm10420-201ENSMUST00000121713 882 ntBASIC22.15■■□□□ 1.14
Cdhr1Q8VHP6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cdhr1Q8VHP6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.14
Cdhr1Q8VHP6 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdhr1Q8VHP6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdhr1Q8VHP6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdhr1Q8VHP6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdhr1Q8VHP6 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdhr1Q8VHP6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
Cdhr1Q8VHP6 Gm44428-201ENSMUST00000204474 874 ntBASIC22.12■■□□□ 1.13
Cdhr1Q8VHP6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Cdhr1Q8VHP6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Cdhr1Q8VHP6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC22.11■■□□□ 1.13
Cdhr1Q8VHP6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cdhr1Q8VHP6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cdhr1Q8VHP6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Cdhr1Q8VHP6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cdhr1Q8VHP6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cdhr1Q8VHP6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Cdhr1Q8VHP6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.09■■□□□ 1.13
Cdhr1Q8VHP6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cdhr1Q8VHP6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Cdhr1Q8VHP6 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cdhr1Q8VHP6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cdhr1Q8VHP6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cdhr1Q8VHP6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.06■■□□□ 1.12
Cdhr1Q8VHP6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdhr1Q8VHP6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC22.06■■□□□ 1.12
Cdhr1Q8VHP6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdhr1Q8VHP6 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.04■■□□□ 1.12
Cdhr1Q8VHP6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
Cdhr1Q8VHP6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cdhr1Q8VHP6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Cdhr1Q8VHP6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdhr1Q8VHP6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms