Protein–RNA interactions for Protein: Q8VCC8

Rapgef3, Rap guanine nucleotide exchange factor 3, mousemouse

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rapgef3Q8VCC8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC32.51■■■□□ 2.8
Rapgef3Q8VCC8 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC32.51■■■□□ 2.79
Rapgef3Q8VCC8 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Rapgef3Q8VCC8 Gm5297-201ENSMUST00000198555 1171 ntBASIC32.5■■■□□ 2.79
Rapgef3Q8VCC8 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Rapgef3Q8VCC8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC32.5■■■□□ 2.79
Rapgef3Q8VCC8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC32.49■■■□□ 2.79
Rapgef3Q8VCC8 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Rapgef3Q8VCC8 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rapgef3Q8VCC8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rapgef3Q8VCC8 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC32.48■■■□□ 2.79
Rapgef3Q8VCC8 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC32.48■■■□□ 2.79
Rapgef3Q8VCC8 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC32.47■■■□□ 2.79
Rapgef3Q8VCC8 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Rapgef3Q8VCC8 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
Rapgef3Q8VCC8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Rapgef3Q8VCC8 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC32.44■■■□□ 2.78
Rapgef3Q8VCC8 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC32.44■■■□□ 2.78
Rapgef3Q8VCC8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC32.43■■■□□ 2.78
Rapgef3Q8VCC8 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC32.43■■■□□ 2.78
Rapgef3Q8VCC8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rapgef3Q8VCC8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
Rapgef3Q8VCC8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
Rapgef3Q8VCC8 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC32.42■■■□□ 2.78
Rapgef3Q8VCC8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rapgef3Q8VCC8 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC32.41■■■□□ 2.78
Rapgef3Q8VCC8 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rapgef3Q8VCC8 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC32.41■■■□□ 2.78
Rapgef3Q8VCC8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC32.41■■■□□ 2.78
Rapgef3Q8VCC8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC32.4■■■□□ 2.78
Rapgef3Q8VCC8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
Rapgef3Q8VCC8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC32.39■■■□□ 2.78
Rapgef3Q8VCC8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC32.38■■■□□ 2.77
Rapgef3Q8VCC8 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Rapgef3Q8VCC8 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
Rapgef3Q8VCC8 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC32.36■■■□□ 2.77
Rapgef3Q8VCC8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC32.35■■■□□ 2.77
Rapgef3Q8VCC8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rapgef3Q8VCC8 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
Rapgef3Q8VCC8 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC32.35■■■□□ 2.77
Rapgef3Q8VCC8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Rapgef3Q8VCC8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Rapgef3Q8VCC8 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
Rapgef3Q8VCC8 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC32.34■■■□□ 2.77
Rapgef3Q8VCC8 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC32.34■■■□□ 2.77
Rapgef3Q8VCC8 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC32.34■■■□□ 2.77
Rapgef3Q8VCC8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC32.33■■■□□ 2.77
Rapgef3Q8VCC8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC32.33■■■□□ 2.77
Rapgef3Q8VCC8 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC32.31■■■□□ 2.76
Rapgef3Q8VCC8 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC32.31■■■□□ 2.76
Rapgef3Q8VCC8 Etf1-202ENSMUST00000180351 108 ntBASIC32.31■■■□□ 2.76
Rapgef3Q8VCC8 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
Rapgef3Q8VCC8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
Rapgef3Q8VCC8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
Rapgef3Q8VCC8 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC32.29■■■□□ 2.76
Rapgef3Q8VCC8 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC32.28■■■□□ 2.76
Rapgef3Q8VCC8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
Rapgef3Q8VCC8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Rapgef3Q8VCC8 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC32.27■■■□□ 2.76
Rapgef3Q8VCC8 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.75
Rapgef3Q8VCC8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC32.26■■■□□ 2.75
Rapgef3Q8VCC8 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
Rapgef3Q8VCC8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC32.26■■■□□ 2.75
Rapgef3Q8VCC8 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC32.25■■■□□ 2.75
Rapgef3Q8VCC8 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
Rapgef3Q8VCC8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC32.24■■■□□ 2.75
Rapgef3Q8VCC8 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rapgef3Q8VCC8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rapgef3Q8VCC8 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC32.23■■■□□ 2.75
Rapgef3Q8VCC8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
Rapgef3Q8VCC8 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC32.23■■■□□ 2.75
Rapgef3Q8VCC8 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
Rapgef3Q8VCC8 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC32.22■■■□□ 2.75
Rapgef3Q8VCC8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
Rapgef3Q8VCC8 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
Rapgef3Q8VCC8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
Rapgef3Q8VCC8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
Rapgef3Q8VCC8 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
Rapgef3Q8VCC8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC32.19■■■□□ 2.74
Rapgef3Q8VCC8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Rapgef3Q8VCC8 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC32.16■■■□□ 2.74
Rapgef3Q8VCC8 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
Rapgef3Q8VCC8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Rapgef3Q8VCC8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC32.15■■■□□ 2.74
Rapgef3Q8VCC8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Rapgef3Q8VCC8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Rapgef3Q8VCC8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Rapgef3Q8VCC8 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
Rapgef3Q8VCC8 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC32.13■■■□□ 2.73
Rapgef3Q8VCC8 Gm13241-201ENSMUST00000094493 780 ntBASIC32.13■■■□□ 2.73
Rapgef3Q8VCC8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
Rapgef3Q8VCC8 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Rapgef3Q8VCC8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
Rapgef3Q8VCC8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
Rapgef3Q8VCC8 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC32.11■■■□□ 2.73
Rapgef3Q8VCC8 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC32.1■■■□□ 2.73
Rapgef3Q8VCC8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC32.1■■■□□ 2.73
Rapgef3Q8VCC8 Gm10232-201ENSMUST00000089221 720 ntBASIC32.1■■■□□ 2.73
Rapgef3Q8VCC8 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Rapgef3Q8VCC8 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms