Protein–RNA interactions for Protein: Q8K4G2

Col23a1, Collagen alpha-1(XXIII) chain, mousemouse

Predictions only

Length 532 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col23a1Q8K4G2 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC28.8■■■□□ 2.2
Col23a1Q8K4G2 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Col23a1Q8K4G2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC28.8■■■□□ 2.2
Col23a1Q8K4G2 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
Col23a1Q8K4G2 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Col23a1Q8K4G2 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC28.79■■■□□ 2.2
Col23a1Q8K4G2 Gm42501-201ENSMUST00000200220 1026 ntBASIC28.79■■■□□ 2.2
Col23a1Q8K4G2 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col23a1Q8K4G2 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC28.78■■■□□ 2.2
Col23a1Q8K4G2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Col23a1Q8K4G2 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Col23a1Q8K4G2 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Col23a1Q8K4G2 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC28.76■■■□□ 2.2
Col23a1Q8K4G2 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Col23a1Q8K4G2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC28.75■■■□□ 2.19
Col23a1Q8K4G2 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
Col23a1Q8K4G2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col23a1Q8K4G2 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col23a1Q8K4G2 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col23a1Q8K4G2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Col23a1Q8K4G2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC28.73■■■□□ 2.19
Col23a1Q8K4G2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Col23a1Q8K4G2 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC28.73■■■□□ 2.19
Col23a1Q8K4G2 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Col23a1Q8K4G2 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Col23a1Q8K4G2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC28.72■■■□□ 2.19
Col23a1Q8K4G2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Col23a1Q8K4G2 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
Col23a1Q8K4G2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Col23a1Q8K4G2 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Col23a1Q8K4G2 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC28.7■■■□□ 2.18
Col23a1Q8K4G2 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Col23a1Q8K4G2 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC28.7■■■□□ 2.18
Col23a1Q8K4G2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC28.7■■■□□ 2.18
Col23a1Q8K4G2 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
Col23a1Q8K4G2 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
Col23a1Q8K4G2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC28.69■■■□□ 2.18
Col23a1Q8K4G2 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
Col23a1Q8K4G2 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.69■■■□□ 2.18
Col23a1Q8K4G2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC28.69■■■□□ 2.18
Col23a1Q8K4G2 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
Col23a1Q8K4G2 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.68■■■□□ 2.18
Col23a1Q8K4G2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
Col23a1Q8K4G2 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Col23a1Q8K4G2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Col23a1Q8K4G2 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
Col23a1Q8K4G2 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Col23a1Q8K4G2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC28.66■■■□□ 2.18
Col23a1Q8K4G2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC28.66■■■□□ 2.18
Col23a1Q8K4G2 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC28.66■■■□□ 2.18
Col23a1Q8K4G2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Col23a1Q8K4G2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC28.65■■■□□ 2.18
Col23a1Q8K4G2 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
Col23a1Q8K4G2 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Col23a1Q8K4G2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Col23a1Q8K4G2 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Col23a1Q8K4G2 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC28.64■■■□□ 2.18
Col23a1Q8K4G2 Gm18755-201ENSMUST00000218030 1099 ntBASIC28.64■■■□□ 2.18
Col23a1Q8K4G2 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC28.63■■■□□ 2.17
Col23a1Q8K4G2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
Col23a1Q8K4G2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC28.61■■■□□ 2.17
Col23a1Q8K4G2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Col23a1Q8K4G2 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC28.6■■■□□ 2.17
Col23a1Q8K4G2 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col23a1Q8K4G2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
Col23a1Q8K4G2 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC28.59■■■□□ 2.17
Col23a1Q8K4G2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC28.59■■■□□ 2.17
Col23a1Q8K4G2 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Col23a1Q8K4G2 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC28.59■■■□□ 2.17
Col23a1Q8K4G2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col23a1Q8K4G2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col23a1Q8K4G2 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col23a1Q8K4G2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col23a1Q8K4G2 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
Col23a1Q8K4G2 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Col23a1Q8K4G2 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC28.58■■■□□ 2.17
Col23a1Q8K4G2 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Col23a1Q8K4G2 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Col23a1Q8K4G2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Col23a1Q8K4G2 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Col23a1Q8K4G2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Col23a1Q8K4G2 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
Col23a1Q8K4G2 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
Col23a1Q8K4G2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC28.53■■■□□ 2.16
Col23a1Q8K4G2 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Col23a1Q8K4G2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
Col23a1Q8K4G2 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC28.52■■■□□ 2.16
Col23a1Q8K4G2 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Col23a1Q8K4G2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Col23a1Q8K4G2 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Col23a1Q8K4G2 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.51■■■□□ 2.15
Col23a1Q8K4G2 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col23a1Q8K4G2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col23a1Q8K4G2 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col23a1Q8K4G2 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col23a1Q8K4G2 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col23a1Q8K4G2 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC28.5■■■□□ 2.15
Col23a1Q8K4G2 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Col23a1Q8K4G2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
Col23a1Q8K4G2 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC28.49■■■□□ 2.15
Retrieved 100 of 76,532 protein–RNA pairs in 68.7 ms