Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Cfap54Q8C6S9 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
Cfap54Q8C6S9 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
Cfap54Q8C6S9 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.41■■□□□ 1.18
Cfap54Q8C6S9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.41■■□□□ 1.18
Cfap54Q8C6S9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
Cfap54Q8C6S9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
Cfap54Q8C6S9 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap54Q8C6S9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.4■■□□□ 1.18
Cfap54Q8C6S9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap54Q8C6S9 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
Cfap54Q8C6S9 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
Cfap54Q8C6S9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap54Q8C6S9 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Cfap54Q8C6S9 Gm43566-201ENSMUST00000196851 808 ntBASIC22.39■■□□□ 1.17
Cfap54Q8C6S9 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
Cfap54Q8C6S9 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.38■■□□□ 1.17
Cfap54Q8C6S9 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Cfap54Q8C6S9 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.37■■□□□ 1.17
Cfap54Q8C6S9 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cfap54Q8C6S9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Cfap54Q8C6S9 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Cfap54Q8C6S9 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.37■■□□□ 1.17
Cfap54Q8C6S9 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap54Q8C6S9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap54Q8C6S9 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.36■■□□□ 1.17
Cfap54Q8C6S9 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC22.36■■□□□ 1.17
Cfap54Q8C6S9 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cfap54Q8C6S9 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cfap54Q8C6S9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cfap54Q8C6S9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cfap54Q8C6S9 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Cfap54Q8C6S9 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Cfap54Q8C6S9 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cfap54Q8C6S9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Cfap54Q8C6S9 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
Cfap54Q8C6S9 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.33■■□□□ 1.17
Cfap54Q8C6S9 Gm45444-201ENSMUST00000211394 898 ntBASIC22.33■■□□□ 1.17
Cfap54Q8C6S9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cfap54Q8C6S9 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Cfap54Q8C6S9 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cfap54Q8C6S9 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cfap54Q8C6S9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cfap54Q8C6S9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC22.32■■□□□ 1.16
Cfap54Q8C6S9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cfap54Q8C6S9 Nsd1-203ENSMUST00000224156 1149 ntBASIC22.32■■□□□ 1.16
Cfap54Q8C6S9 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap54Q8C6S9 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap54Q8C6S9 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap54Q8C6S9 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap54Q8C6S9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.31■■□□□ 1.16
Cfap54Q8C6S9 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cfap54Q8C6S9 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.31■■□□□ 1.16
Cfap54Q8C6S9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap54Q8C6S9 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC22.3■■□□□ 1.16
Cfap54Q8C6S9 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.3■■□□□ 1.16
Cfap54Q8C6S9 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cfap54Q8C6S9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC22.3■■□□□ 1.16
Cfap54Q8C6S9 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cfap54Q8C6S9 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cfap54Q8C6S9 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cfap54Q8C6S9 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cfap54Q8C6S9 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cfap54Q8C6S9 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Cfap54Q8C6S9 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Cfap54Q8C6S9 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
Cfap54Q8C6S9 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap54Q8C6S9 Zxda-201ENSMUST00000117281 2621 ntBASIC22.27■■□□□ 1.16
Cfap54Q8C6S9 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cfap54Q8C6S9 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap54Q8C6S9 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap54Q8C6S9 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap54Q8C6S9 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.26■■□□□ 1.15
Cfap54Q8C6S9 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap54Q8C6S9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap54Q8C6S9 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Cfap54Q8C6S9 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap54Q8C6S9 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap54Q8C6S9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cfap54Q8C6S9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap54Q8C6S9 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.25■■□□□ 1.15
Cfap54Q8C6S9 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap54Q8C6S9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cfap54Q8C6S9 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
Cfap54Q8C6S9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.24■■□□□ 1.15
Cfap54Q8C6S9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cfap54Q8C6S9 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cfap54Q8C6S9 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC22.24■■□□□ 1.15
Cfap54Q8C6S9 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cfap54Q8C6S9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC22.24■■□□□ 1.15
Cfap54Q8C6S9 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC22.24■■□□□ 1.15
Cfap54Q8C6S9 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap54Q8C6S9 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap54Q8C6S9 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap54Q8C6S9 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC22.23■■□□□ 1.15
Cfap54Q8C6S9 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cfap54Q8C6S9 Gm9959-201ENSMUST00000068277 390 ntBASIC22.23■■□□□ 1.15
Cfap54Q8C6S9 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Cfap54Q8C6S9 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.22■■□□□ 1.15
Cfap54Q8C6S9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms