Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Usp6nlQ80XC3 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC25.48■■□□□ 1.67
Usp6nlQ80XC3 Gm44428-201ENSMUST00000204474 874 ntBASIC25.48■■□□□ 1.67
Usp6nlQ80XC3 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
Usp6nlQ80XC3 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Usp6nlQ80XC3 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
Usp6nlQ80XC3 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC25.45■■□□□ 1.66
Usp6nlQ80XC3 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
Usp6nlQ80XC3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
Usp6nlQ80XC3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.44■■□□□ 1.66
Usp6nlQ80XC3 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
Usp6nlQ80XC3 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.44■■□□□ 1.66
Usp6nlQ80XC3 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
Usp6nlQ80XC3 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
Usp6nlQ80XC3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.41■■□□□ 1.66
Usp6nlQ80XC3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Usp6nlQ80XC3 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Usp6nlQ80XC3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC25.4■■□□□ 1.66
Usp6nlQ80XC3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC25.4■■□□□ 1.66
Usp6nlQ80XC3 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Usp6nlQ80XC3 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.39■■□□□ 1.66
Usp6nlQ80XC3 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Usp6nlQ80XC3 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
Usp6nlQ80XC3 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
Usp6nlQ80XC3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
Usp6nlQ80XC3 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Usp6nlQ80XC3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC25.37■■□□□ 1.65
Usp6nlQ80XC3 Amer2-203ENSMUST00000225247 2662 ntBASIC25.36■■□□□ 1.65
Usp6nlQ80XC3 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Usp6nlQ80XC3 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Usp6nlQ80XC3 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Usp6nlQ80XC3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.35■■□□□ 1.65
Usp6nlQ80XC3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Gm15546-201ENSMUST00000122095 826 ntBASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.34■■□□□ 1.65
Usp6nlQ80XC3 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Usp6nlQ80XC3 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Usp6nlQ80XC3 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC25.33■■□□□ 1.65
Usp6nlQ80XC3 Gm22567-201ENSMUST00000175542 342 ntBASIC25.33■■□□□ 1.65
Usp6nlQ80XC3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Usp6nlQ80XC3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Usp6nlQ80XC3 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC25.32■■□□□ 1.64
Usp6nlQ80XC3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Usp6nlQ80XC3 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.32■■□□□ 1.64
Usp6nlQ80XC3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC25.31■■□□□ 1.64
Usp6nlQ80XC3 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC25.3■■□□□ 1.64
Usp6nlQ80XC3 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Usp6nlQ80XC3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Usp6nlQ80XC3 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Usp6nlQ80XC3 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC25.29■■□□□ 1.64
Usp6nlQ80XC3 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Usp6nlQ80XC3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Usp6nlQ80XC3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC25.29■■□□□ 1.64
Usp6nlQ80XC3 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC25.28■■□□□ 1.64
Usp6nlQ80XC3 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
Usp6nlQ80XC3 Gm5522-201ENSMUST00000189483 1242 ntBASIC25.27■■□□□ 1.64
Usp6nlQ80XC3 Gm43592-201ENSMUST00000196922 1165 ntBASIC25.27■■□□□ 1.64
Usp6nlQ80XC3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Usp6nlQ80XC3 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
Usp6nlQ80XC3 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.25■■□□□ 1.63
Usp6nlQ80XC3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Usp6nlQ80XC3 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Usp6nlQ80XC3 Gm13238-201ENSMUST00000117655 780 ntBASIC25.23■■□□□ 1.63
Usp6nlQ80XC3 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC25.22■■□□□ 1.63
Usp6nlQ80XC3 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Usp6nlQ80XC3 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC25.22■■□□□ 1.63
Usp6nlQ80XC3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC25.22■■□□□ 1.63
Usp6nlQ80XC3 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Usp6nlQ80XC3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC25.2■■□□□ 1.62
Usp6nlQ80XC3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
Usp6nlQ80XC3 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC25.2■■□□□ 1.62
Usp6nlQ80XC3 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC25.2■■□□□ 1.62
Usp6nlQ80XC3 Gm43566-201ENSMUST00000196851 808 ntBASIC25.19■■□□□ 1.62
Usp6nlQ80XC3 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC25.19■■□□□ 1.62
Usp6nlQ80XC3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC25.19■■□□□ 1.62
Usp6nlQ80XC3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.19■■□□□ 1.62
Usp6nlQ80XC3 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
Usp6nlQ80XC3 Nsd1-203ENSMUST00000224156 1149 ntBASIC25.17■■□□□ 1.62
Usp6nlQ80XC3 AC117769.4-201ENSMUST00000225679 685 ntBASIC25.16■■□□□ 1.62
Usp6nlQ80XC3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
Usp6nlQ80XC3 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
Usp6nlQ80XC3 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC25.15■■□□□ 1.62
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms