Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ShbQ6PD21 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC25.69■■□□□ 1.7
ShbQ6PD21 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
ShbQ6PD21 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
ShbQ6PD21 Gm9959-201ENSMUST00000068277 390 ntBASIC25.69■■□□□ 1.7
ShbQ6PD21 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
ShbQ6PD21 Gm42501-201ENSMUST00000200220 1026 ntBASIC25.68■■□□□ 1.7
ShbQ6PD21 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC25.68■■□□□ 1.7
ShbQ6PD21 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
ShbQ6PD21 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ShbQ6PD21 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
ShbQ6PD21 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
ShbQ6PD21 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
ShbQ6PD21 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
ShbQ6PD21 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC25.65■■□□□ 1.7
ShbQ6PD21 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
ShbQ6PD21 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ShbQ6PD21 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
ShbQ6PD21 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
ShbQ6PD21 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.64■■□□□ 1.69
ShbQ6PD21 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
ShbQ6PD21 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ShbQ6PD21 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC25.62■■□□□ 1.69
ShbQ6PD21 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
ShbQ6PD21 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.62■■□□□ 1.69
ShbQ6PD21 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC25.61■■□□□ 1.69
ShbQ6PD21 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC25.61■■□□□ 1.69
ShbQ6PD21 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
ShbQ6PD21 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
ShbQ6PD21 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC25.6■■□□□ 1.69
ShbQ6PD21 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ShbQ6PD21 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
ShbQ6PD21 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ShbQ6PD21 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
ShbQ6PD21 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShbQ6PD21 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShbQ6PD21 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShbQ6PD21 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
ShbQ6PD21 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC25.59■■□□□ 1.69
ShbQ6PD21 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC25.59■■□□□ 1.69
ShbQ6PD21 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC25.59■■□□□ 1.69
ShbQ6PD21 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ShbQ6PD21 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
ShbQ6PD21 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC25.58■■□□□ 1.69
ShbQ6PD21 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC25.58■■□□□ 1.68
ShbQ6PD21 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
ShbQ6PD21 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC25.57■■□□□ 1.68
ShbQ6PD21 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
ShbQ6PD21 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
ShbQ6PD21 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC25.56■■□□□ 1.68
ShbQ6PD21 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
ShbQ6PD21 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC25.55■■□□□ 1.68
ShbQ6PD21 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC25.55■■□□□ 1.68
ShbQ6PD21 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ShbQ6PD21 Gm18755-201ENSMUST00000218030 1099 ntBASIC25.54■■□□□ 1.68
ShbQ6PD21 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ShbQ6PD21 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ShbQ6PD21 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
ShbQ6PD21 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
ShbQ6PD21 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ShbQ6PD21 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
ShbQ6PD21 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
ShbQ6PD21 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ShbQ6PD21 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
ShbQ6PD21 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
ShbQ6PD21 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC25.51■■□□□ 1.67
ShbQ6PD21 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC25.51■■□□□ 1.67
ShbQ6PD21 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ShbQ6PD21 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC25.51■■□□□ 1.67
ShbQ6PD21 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ShbQ6PD21 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ShbQ6PD21 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ShbQ6PD21 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC25.5■■□□□ 1.67
ShbQ6PD21 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ShbQ6PD21 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC25.49■■□□□ 1.67
ShbQ6PD21 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC25.49■■□□□ 1.67
ShbQ6PD21 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ShbQ6PD21 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC25.47■■□□□ 1.67
ShbQ6PD21 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ShbQ6PD21 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
ShbQ6PD21 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
ShbQ6PD21 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC25.45■■□□□ 1.66
ShbQ6PD21 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC25.45■■□□□ 1.66
ShbQ6PD21 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.66
ShbQ6PD21 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC25.45■■□□□ 1.66
ShbQ6PD21 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ShbQ6PD21 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC25.44■■□□□ 1.66
ShbQ6PD21 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ShbQ6PD21 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC25.43■■□□□ 1.66
ShbQ6PD21 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ShbQ6PD21 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ShbQ6PD21 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
ShbQ6PD21 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
ShbQ6PD21 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
ShbQ6PD21 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ShbQ6PD21 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC25.41■■□□□ 1.66
ShbQ6PD21 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShbQ6PD21 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShbQ6PD21 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
ShbQ6PD21 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms