Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd3Q6P9Z1 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd3Q6P9Z1 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd3Q6P9Z1 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd3Q6P9Z1 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd3Q6P9Z1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd3Q6P9Z1 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Smarcd3Q6P9Z1 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcd3Q6P9Z1 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC20.69■□□□□ 0.9
Smarcd3Q6P9Z1 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.69■□□□□ 0.9
Smarcd3Q6P9Z1 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcd3Q6P9Z1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Smarcd3Q6P9Z1 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Smarcd3Q6P9Z1 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC20.69■□□□□ 0.9
Smarcd3Q6P9Z1 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcd3Q6P9Z1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcd3Q6P9Z1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcd3Q6P9Z1 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC20.68■□□□□ 0.9
Smarcd3Q6P9Z1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Smarcd3Q6P9Z1 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Smarcd3Q6P9Z1 Gm42809-201ENSMUST00000198429 1138 ntBASIC20.67■□□□□ 0.9
Smarcd3Q6P9Z1 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20.67■□□□□ 0.9
Smarcd3Q6P9Z1 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Smarcd3Q6P9Z1 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcd3Q6P9Z1 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC20.66■□□□□ 0.9
Smarcd3Q6P9Z1 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.66■□□□□ 0.9
Smarcd3Q6P9Z1 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcd3Q6P9Z1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Smarcd3Q6P9Z1 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcd3Q6P9Z1 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcd3Q6P9Z1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcd3Q6P9Z1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcd3Q6P9Z1 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcd3Q6P9Z1 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC20.65■□□□□ 0.9
Smarcd3Q6P9Z1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Smarcd3Q6P9Z1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcd3Q6P9Z1 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.64■□□□□ 0.89
Smarcd3Q6P9Z1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcd3Q6P9Z1 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcd3Q6P9Z1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.64■□□□□ 0.89
Smarcd3Q6P9Z1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Smarcd3Q6P9Z1 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcd3Q6P9Z1 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Smarcd3Q6P9Z1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcd3Q6P9Z1 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcd3Q6P9Z1 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Smarcd3Q6P9Z1 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Smarcd3Q6P9Z1 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Smarcd3Q6P9Z1 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Smarcd3Q6P9Z1 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Smarcd3Q6P9Z1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Smarcd3Q6P9Z1 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Smarcd3Q6P9Z1 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcd3Q6P9Z1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcd3Q6P9Z1 Gm37136-201ENSMUST00000194368 194 ntBASIC20.6■□□□□ 0.89
Smarcd3Q6P9Z1 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Smarcd3Q6P9Z1 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd3Q6P9Z1 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd3Q6P9Z1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd3Q6P9Z1 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Smarcd3Q6P9Z1 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Smarcd3Q6P9Z1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcd3Q6P9Z1 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.58■□□□□ 0.89
Smarcd3Q6P9Z1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcd3Q6P9Z1 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcd3Q6P9Z1 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Smarcd3Q6P9Z1 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC20.58■□□□□ 0.89
Smarcd3Q6P9Z1 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC20.58■□□□□ 0.88
Smarcd3Q6P9Z1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd3Q6P9Z1 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Smarcd3Q6P9Z1 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Smarcd3Q6P9Z1 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.57■□□□□ 0.88
Smarcd3Q6P9Z1 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Smarcd3Q6P9Z1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Smarcd3Q6P9Z1 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Smarcd3Q6P9Z1 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.57■□□□□ 0.88
Smarcd3Q6P9Z1 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Smarcd3Q6P9Z1 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcd3Q6P9Z1 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcd3Q6P9Z1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Smarcd3Q6P9Z1 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Smarcd3Q6P9Z1 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Smarcd3Q6P9Z1 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC20.54■□□□□ 0.88
Smarcd3Q6P9Z1 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC20.54■□□□□ 0.88
Smarcd3Q6P9Z1 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd3Q6P9Z1 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC20.54■□□□□ 0.88
Smarcd3Q6P9Z1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Smarcd3Q6P9Z1 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd3Q6P9Z1 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd3Q6P9Z1 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd3Q6P9Z1 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd3Q6P9Z1 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Smarcd3Q6P9Z1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcd3Q6P9Z1 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Smarcd3Q6P9Z1 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smarcd3Q6P9Z1 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Smarcd3Q6P9Z1 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd3Q6P9Z1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Smarcd3Q6P9Z1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.5■□□□□ 0.87
Smarcd3Q6P9Z1 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms