Protein–RNA interactions for Protein: Q5SSA0

Vmn1r223, Vomeronasal type-1 receptor, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmn1r223Q5SSA0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmn1r223Q5SSA0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.69■□□□□ 0.74
Vmn1r223Q5SSA0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmn1r223Q5SSA0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Vmn1r223Q5SSA0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r223Q5SSA0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r223Q5SSA0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Vmn1r223Q5SSA0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.67■□□□□ 0.74
Vmn1r223Q5SSA0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.67■□□□□ 0.74
Vmn1r223Q5SSA0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Vmn1r223Q5SSA0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r223Q5SSA0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r223Q5SSA0 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r223Q5SSA0 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Vmn1r223Q5SSA0 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vmn1r223Q5SSA0 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vmn1r223Q5SSA0 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vmn1r223Q5SSA0 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vmn1r223Q5SSA0 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Vmn1r223Q5SSA0 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vmn1r223Q5SSA0 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vmn1r223Q5SSA0 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Vmn1r223Q5SSA0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Vmn1r223Q5SSA0 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Vmn1r223Q5SSA0 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vmn1r223Q5SSA0 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Vmn1r223Q5SSA0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vmn1r223Q5SSA0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.62■□□□□ 0.73
Vmn1r223Q5SSA0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Vmn1r223Q5SSA0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Vmn1r223Q5SSA0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Vmn1r223Q5SSA0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vmn1r223Q5SSA0 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.61■□□□□ 0.73
Vmn1r223Q5SSA0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.61■□□□□ 0.73
Vmn1r223Q5SSA0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Vmn1r223Q5SSA0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vmn1r223Q5SSA0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vmn1r223Q5SSA0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Vmn1r223Q5SSA0 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Vmn1r223Q5SSA0 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.6■□□□□ 0.73
Vmn1r223Q5SSA0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Vmn1r223Q5SSA0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vmn1r223Q5SSA0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vmn1r223Q5SSA0 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Vmn1r223Q5SSA0 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
Vmn1r223Q5SSA0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.59■□□□□ 0.73
Vmn1r223Q5SSA0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Vmn1r223Q5SSA0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Vmn1r223Q5SSA0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Vmn1r223Q5SSA0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.58■□□□□ 0.72
Vmn1r223Q5SSA0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vmn1r223Q5SSA0 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vmn1r223Q5SSA0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vmn1r223Q5SSA0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Vmn1r223Q5SSA0 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmn1r223Q5SSA0 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmn1r223Q5SSA0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Vmn1r223Q5SSA0 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmn1r223Q5SSA0 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmn1r223Q5SSA0 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Vmn1r223Q5SSA0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Vmn1r223Q5SSA0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Vmn1r223Q5SSA0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmn1r223Q5SSA0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Vmn1r223Q5SSA0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Vmn1r223Q5SSA0 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r223Q5SSA0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r223Q5SSA0 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r223Q5SSA0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r223Q5SSA0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC19.53■□□□□ 0.72
Vmn1r223Q5SSA0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r223Q5SSA0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.53■□□□□ 0.72
Vmn1r223Q5SSA0 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r223Q5SSA0 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Vmn1r223Q5SSA0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vmn1r223Q5SSA0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Vmn1r223Q5SSA0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Vmn1r223Q5SSA0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Vmn1r223Q5SSA0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Vmn1r223Q5SSA0 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r223Q5SSA0 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r223Q5SSA0 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r223Q5SSA0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r223Q5SSA0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Vmn1r223Q5SSA0 Gm4419-202ENSMUST00000226239 1431 ntBASIC19.51■□□□□ 0.71
Vmn1r223Q5SSA0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vmn1r223Q5SSA0 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vmn1r223Q5SSA0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Vmn1r223Q5SSA0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Vmn1r223Q5SSA0 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms