Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC41.83■■■■■ 4.29
Pds5bQ4VA53 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC41.82■■■■■ 4.28
Pds5bQ4VA53 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC41.82■■■■■ 4.28
Pds5bQ4VA53 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC41.81■■■■■ 4.28
Pds5bQ4VA53 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC41.81■■■■■ 4.28
Pds5bQ4VA53 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC41.81■■■■■ 4.28
Pds5bQ4VA53 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC41.8■■■■■ 4.28
Pds5bQ4VA53 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC41.79■■■■■ 4.28
Pds5bQ4VA53 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC41.79■■■■■ 4.28
Pds5bQ4VA53 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC41.78■■■■■ 4.28
Pds5bQ4VA53 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC41.77■■■■■ 4.28
Pds5bQ4VA53 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC41.77■■■■■ 4.28
Pds5bQ4VA53 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC41.77■■■■■ 4.28
Pds5bQ4VA53 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC41.76■■■■■ 4.28
Pds5bQ4VA53 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC41.75■■■■■ 4.27
Pds5bQ4VA53 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC41.75■■■■■ 4.27
Pds5bQ4VA53 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC41.75■■■■■ 4.27
Pds5bQ4VA53 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC41.74■■■■■ 4.27
Pds5bQ4VA53 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC41.72■■■■■ 4.27
Pds5bQ4VA53 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC41.71■■■■■ 4.27
Pds5bQ4VA53 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC41.7■■■■■ 4.27
Pds5bQ4VA53 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC41.7■■■■■ 4.27
Pds5bQ4VA53 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC41.7■■■■■ 4.27
Pds5bQ4VA53 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC41.69■■■■■ 4.26
Pds5bQ4VA53 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC41.69■■■■■ 4.26
Pds5bQ4VA53 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC41.69■■■■■ 4.26
Pds5bQ4VA53 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC41.69■■■■■ 4.26
Pds5bQ4VA53 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC41.68■■■■■ 4.26
Pds5bQ4VA53 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC41.68■■■■■ 4.26
Pds5bQ4VA53 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC41.64■■■■■ 4.26
Pds5bQ4VA53 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC41.64■■■■■ 4.26
Pds5bQ4VA53 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC41.64■■■■■ 4.26
Pds5bQ4VA53 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC41.64■■■■■ 4.26
Pds5bQ4VA53 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC41.64■■■■■ 4.26
Pds5bQ4VA53 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC41.63■■■■■ 4.26
Pds5bQ4VA53 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC41.63■■■■■ 4.26
Pds5bQ4VA53 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC41.62■■■■■ 4.25
Pds5bQ4VA53 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC41.62■■■■■ 4.25
Pds5bQ4VA53 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC41.62■■■■■ 4.25
Pds5bQ4VA53 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC41.62■■■■■ 4.25
Pds5bQ4VA53 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC41.61■■■■■ 4.25
Pds5bQ4VA53 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC41.61■■■■■ 4.25
Pds5bQ4VA53 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC41.6■■■■■ 4.25
Pds5bQ4VA53 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC41.6■■■■■ 4.25
Pds5bQ4VA53 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC41.6■■■■■ 4.25
Pds5bQ4VA53 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC41.58■■■■■ 4.25
Pds5bQ4VA53 Gm5297-201ENSMUST00000198555 1171 ntBASIC41.58■■■■■ 4.25
Pds5bQ4VA53 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC41.58■■■■■ 4.25
Pds5bQ4VA53 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC41.57■■■■■ 4.25
Pds5bQ4VA53 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC41.56■■■■■ 4.24
Pds5bQ4VA53 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC41.55■■■■■ 4.24
Pds5bQ4VA53 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC41.54■■■■■ 4.24
Pds5bQ4VA53 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC41.53■■■■■ 4.24
Pds5bQ4VA53 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC41.52■■■■■ 4.24
Pds5bQ4VA53 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC41.52■■■■■ 4.24
Pds5bQ4VA53 Gm14121-201ENSMUST00000121441 1380 ntBASIC41.52■■■■■ 4.24
Pds5bQ4VA53 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC41.52■■■■■ 4.24
Pds5bQ4VA53 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC41.51■■■■■ 4.24
Pds5bQ4VA53 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC41.51■■■■■ 4.24
Pds5bQ4VA53 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC41.49■■■■■ 4.23
Pds5bQ4VA53 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC41.48■■■■■ 4.23
Pds5bQ4VA53 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC41.47■■■■■ 4.23
Pds5bQ4VA53 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC41.47■■■■■ 4.23
Pds5bQ4VA53 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC41.46■■■■■ 4.23
Pds5bQ4VA53 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC41.46■■■■■ 4.23
Pds5bQ4VA53 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC41.45■■■■■ 4.23
Pds5bQ4VA53 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC41.45■■■■■ 4.23
Pds5bQ4VA53 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC41.44■■■■■ 4.22
Pds5bQ4VA53 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC41.44■■■■■ 4.22
Pds5bQ4VA53 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC41.43■■■■■ 4.22
Pds5bQ4VA53 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC41.43■■■■■ 4.22
Pds5bQ4VA53 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC41.42■■■■■ 4.22
Pds5bQ4VA53 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC41.42■■■■■ 4.22
Pds5bQ4VA53 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC41.41■■■■■ 4.22
Pds5bQ4VA53 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC41.4■■■■■ 4.22
Pds5bQ4VA53 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC41.4■■■■■ 4.22
Pds5bQ4VA53 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC41.4■■■■■ 4.22
Pds5bQ4VA53 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC41.39■■■■■ 4.22
Pds5bQ4VA53 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC41.39■■■■■ 4.22
Pds5bQ4VA53 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC41.39■■■■■ 4.22
Pds5bQ4VA53 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC41.37■■■■■ 4.21
Pds5bQ4VA53 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC41.36■■■■■ 4.21
Pds5bQ4VA53 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC41.33■■■■■ 4.21
Pds5bQ4VA53 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC41.32■■■■■ 4.21
Pds5bQ4VA53 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC41.32■■■■■ 4.2
Pds5bQ4VA53 Etf1-202ENSMUST00000180351 108 ntBASIC41.31■■■■■ 4.2
Pds5bQ4VA53 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC41.29■■■■■ 4.2
Pds5bQ4VA53 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC41.29■■■■■ 4.2
Pds5bQ4VA53 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
Pds5bQ4VA53 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC41.28■■■■■ 4.2
Pds5bQ4VA53 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC41.28■■■■■ 4.2
Pds5bQ4VA53 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC41.28■■■■■ 4.2
Pds5bQ4VA53 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC41.27■■■■■ 4.2
Pds5bQ4VA53 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC41.27■■■■■ 4.2
Pds5bQ4VA53 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC41.27■■■■■ 4.2
Pds5bQ4VA53 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC41.27■■■■■ 4.2
Pds5bQ4VA53 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC41.27■■■■■ 4.2
Pds5bQ4VA53 Gm10232-201ENSMUST00000089221 720 ntBASIC41.27■■■■■ 4.2
Pds5bQ4VA53 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.2
Pds5bQ4VA53 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC41.26■■■■■ 4.19
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms