Protein–RNA interactions for Protein: Q3UF64

Rnft2, RING finger and transmembrane domain-containing protein 2, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft2Q3UF64 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnft2Q3UF64 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnft2Q3UF64 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnft2Q3UF64 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnft2Q3UF64 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.71■□□□□ 0.75
Rnft2Q3UF64 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnft2Q3UF64 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnft2Q3UF64 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnft2Q3UF64 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
Rnft2Q3UF64 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rnft2Q3UF64 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnft2Q3UF64 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rnft2Q3UF64 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rnft2Q3UF64 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnft2Q3UF64 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnft2Q3UF64 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnft2Q3UF64 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnft2Q3UF64 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnft2Q3UF64 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnft2Q3UF64 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnft2Q3UF64 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnft2Q3UF64 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnft2Q3UF64 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Rnft2Q3UF64 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rnft2Q3UF64 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Rnft2Q3UF64 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnft2Q3UF64 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnft2Q3UF64 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.66■□□□□ 0.74
Rnft2Q3UF64 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rnft2Q3UF64 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Rnft2Q3UF64 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnft2Q3UF64 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rnft2Q3UF64 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnft2Q3UF64 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnft2Q3UF64 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rnft2Q3UF64 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Rnft2Q3UF64 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnft2Q3UF64 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.64■□□□□ 0.73
Rnft2Q3UF64 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnft2Q3UF64 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnft2Q3UF64 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnft2Q3UF64 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnft2Q3UF64 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnft2Q3UF64 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnft2Q3UF64 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnft2Q3UF64 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnft2Q3UF64 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnft2Q3UF64 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Rnft2Q3UF64 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnft2Q3UF64 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.61■□□□□ 0.73
Rnft2Q3UF64 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.61■□□□□ 0.73
Rnft2Q3UF64 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnft2Q3UF64 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
Rnft2Q3UF64 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnft2Q3UF64 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnft2Q3UF64 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnft2Q3UF64 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnft2Q3UF64 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnft2Q3UF64 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rnft2Q3UF64 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnft2Q3UF64 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnft2Q3UF64 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnft2Q3UF64 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnft2Q3UF64 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
Rnft2Q3UF64 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.58■□□□□ 0.73
Rnft2Q3UF64 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnft2Q3UF64 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnft2Q3UF64 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnft2Q3UF64 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnft2Q3UF64 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnft2Q3UF64 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnft2Q3UF64 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnft2Q3UF64 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnft2Q3UF64 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnft2Q3UF64 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rnft2Q3UF64 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rnft2Q3UF64 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Rnft2Q3UF64 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.56■□□□□ 0.72
Rnft2Q3UF64 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Rnft2Q3UF64 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnft2Q3UF64 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnft2Q3UF64 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnft2Q3UF64 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnft2Q3UF64 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.55■□□□□ 0.72
Rnft2Q3UF64 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnft2Q3UF64 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnft2Q3UF64 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnft2Q3UF64 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Rnft2Q3UF64 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnft2Q3UF64 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 111 ms