Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssbp4Q3U4B1 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Ssbp4Q3U4B1 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ssbp4Q3U4B1 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Ssbp4Q3U4B1 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC19.18■□□□□ 0.66
Ssbp4Q3U4B1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Ssbp4Q3U4B1 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Ssbp4Q3U4B1 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Ssbp4Q3U4B1 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssbp4Q3U4B1 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC19.17■□□□□ 0.66
Ssbp4Q3U4B1 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.17■□□□□ 0.66
Ssbp4Q3U4B1 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssbp4Q3U4B1 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Ssbp4Q3U4B1 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Ssbp4Q3U4B1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssbp4Q3U4B1 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC19.16■□□□□ 0.66
Ssbp4Q3U4B1 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssbp4Q3U4B1 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Ssbp4Q3U4B1 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC19.15■□□□□ 0.66
Ssbp4Q3U4B1 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ssbp4Q3U4B1 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.15■□□□□ 0.66
Ssbp4Q3U4B1 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ssbp4Q3U4B1 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ssbp4Q3U4B1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ssbp4Q3U4B1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ssbp4Q3U4B1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ssbp4Q3U4B1 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Ssbp4Q3U4B1 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Ssbp4Q3U4B1 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Gm44428-201ENSMUST00000204474 874 ntBASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 AC151971.4-201ENSMUST00000214717 704 ntBASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ssbp4Q3U4B1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ssbp4Q3U4B1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssbp4Q3U4B1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ssbp4Q3U4B1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ssbp4Q3U4B1 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC19.08■□□□□ 0.64
Ssbp4Q3U4B1 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Ssbp4Q3U4B1 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ssbp4Q3U4B1 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.07■□□□□ 0.64
Ssbp4Q3U4B1 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ssbp4Q3U4B1 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssbp4Q3U4B1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssbp4Q3U4B1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ssbp4Q3U4B1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC19.05■□□□□ 0.64
Ssbp4Q3U4B1 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC19.05■□□□□ 0.64
Ssbp4Q3U4B1 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.05■□□□□ 0.64
Ssbp4Q3U4B1 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Ssbp4Q3U4B1 Gm5067-201ENSMUST00000170449 1009 ntBASIC19.05■□□□□ 0.64
Ssbp4Q3U4B1 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.05■□□□□ 0.64
Ssbp4Q3U4B1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ssbp4Q3U4B1 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssbp4Q3U4B1 Gm10420-201ENSMUST00000121713 882 ntBASIC19.04■□□□□ 0.64
Ssbp4Q3U4B1 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ssbp4Q3U4B1 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssbp4Q3U4B1 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.04■□□□□ 0.64
Ssbp4Q3U4B1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ssbp4Q3U4B1 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Ssbp4Q3U4B1 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.04■□□□□ 0.64
Ssbp4Q3U4B1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Ssbp4Q3U4B1 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
Ssbp4Q3U4B1 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.03■□□□□ 0.64
Ssbp4Q3U4B1 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.03■□□□□ 0.64
Ssbp4Q3U4B1 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ssbp4Q3U4B1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssbp4Q3U4B1 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Ssbp4Q3U4B1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Ssbp4Q3U4B1 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssbp4Q3U4B1 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ssbp4Q3U4B1 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ssbp4Q3U4B1 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
Ssbp4Q3U4B1 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssbp4Q3U4B1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Ssbp4Q3U4B1 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Ssbp4Q3U4B1 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Ssbp4Q3U4B1 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssbp4Q3U4B1 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssbp4Q3U4B1 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19■□□□□ 0.63
Ssbp4Q3U4B1 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC19■□□□□ 0.63
Ssbp4Q3U4B1 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssbp4Q3U4B1 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssbp4Q3U4B1 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Ssbp4Q3U4B1 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssbp4Q3U4B1 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssbp4Q3U4B1 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC18.99■□□□□ 0.63
Ssbp4Q3U4B1 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Ssbp4Q3U4B1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssbp4Q3U4B1 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Ssbp4Q3U4B1 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssbp4Q3U4B1 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Ssbp4Q3U4B1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Ssbp4Q3U4B1 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms