Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Cxcl12P40224 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Cxcl12P40224 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Cxcl12P40224 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC24.12■■□□□ 1.45
Cxcl12P40224 Gm45444-201ENSMUST00000211394 898 ntBASIC24.12■■□□□ 1.45
Cxcl12P40224 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
Cxcl12P40224 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Cxcl12P40224 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Cxcl12P40224 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC24.11■■□□□ 1.45
Cxcl12P40224 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
Cxcl12P40224 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cxcl12P40224 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC24.1■■□□□ 1.45
Cxcl12P40224 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cxcl12P40224 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
Cxcl12P40224 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Cxcl12P40224 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
Cxcl12P40224 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC24.08■■□□□ 1.45
Cxcl12P40224 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cxcl12P40224 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cxcl12P40224 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC24.07■■□□□ 1.44
Cxcl12P40224 Gm9959-201ENSMUST00000068277 390 ntBASIC24.07■■□□□ 1.44
Cxcl12P40224 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Cxcl12P40224 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cxcl12P40224 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
Cxcl12P40224 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cxcl12P40224 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cxcl12P40224 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
Cxcl12P40224 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cxcl12P40224 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cxcl12P40224 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cxcl12P40224 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cxcl12P40224 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cxcl12P40224 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cxcl12P40224 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cxcl12P40224 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cxcl12P40224 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC24.03■■□□□ 1.44
Cxcl12P40224 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
Cxcl12P40224 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
Cxcl12P40224 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cxcl12P40224 Gm18755-201ENSMUST00000218030 1099 ntBASIC24.02■■□□□ 1.44
Cxcl12P40224 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC24.02■■□□□ 1.44
Cxcl12P40224 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC24.02■■□□□ 1.44
Cxcl12P40224 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cxcl12P40224 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Cxcl12P40224 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC24.01■■□□□ 1.43
Cxcl12P40224 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cxcl12P40224 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC24.01■■□□□ 1.43
Cxcl12P40224 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Cxcl12P40224 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
Cxcl12P40224 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Cxcl12P40224 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Cxcl12P40224 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cxcl12P40224 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC24■■□□□ 1.43
Cxcl12P40224 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24■■□□□ 1.43
Cxcl12P40224 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cxcl12P40224 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC24■■□□□ 1.43
Cxcl12P40224 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cxcl12P40224 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC24■■□□□ 1.43
Cxcl12P40224 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC23.99■■□□□ 1.43
Cxcl12P40224 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cxcl12P40224 Gm14121-201ENSMUST00000121441 1380 ntBASIC23.99■■□□□ 1.43
Cxcl12P40224 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cxcl12P40224 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cxcl12P40224 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cxcl12P40224 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
Cxcl12P40224 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cxcl12P40224 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cxcl12P40224 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cxcl12P40224 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cxcl12P40224 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Cxcl12P40224 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Cxcl12P40224 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cxcl12P40224 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Cxcl12P40224 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Cxcl12P40224 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
Cxcl12P40224 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Cxcl12P40224 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Cxcl12P40224 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Cxcl12P40224 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC23.92■■□□□ 1.42
Cxcl12P40224 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC23.91■■□□□ 1.42
Cxcl12P40224 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.91■■□□□ 1.42
Cxcl12P40224 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.91■■□□□ 1.42
Cxcl12P40224 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Cxcl12P40224 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Cxcl12P40224 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC23.9■■□□□ 1.42
Cxcl12P40224 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Cxcl12P40224 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Cxcl12P40224 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.89■■□□□ 1.42
Cxcl12P40224 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.89■■□□□ 1.42
Cxcl12P40224 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.41
Cxcl12P40224 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC23.89■■□□□ 1.41
Cxcl12P40224 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC23.88■■□□□ 1.41
Cxcl12P40224 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Cxcl12P40224 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cxcl12P40224 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Cxcl12P40224 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC23.87■■□□□ 1.41
Cxcl12P40224 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Cxcl12P40224 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Cxcl12P40224 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC23.87■■□□□ 1.41
Cxcl12P40224 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms