Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC30.32■■■□□ 2.44
Hoxc9P09633 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Hoxc9P09633 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Hoxc9P09633 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
Hoxc9P09633 Gm4419-202ENSMUST00000226239 1431 ntBASIC30.3■■■□□ 2.44
Hoxc9P09633 Gm5921-201ENSMUST00000075898 882 ntBASIC30.3■■■□□ 2.44
Hoxc9P09633 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC30.3■■■□□ 2.44
Hoxc9P09633 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Hoxc9P09633 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Hoxc9P09633 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC30.29■■■□□ 2.44
Hoxc9P09633 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC30.29■■■□□ 2.44
Hoxc9P09633 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC30.29■■■□□ 2.44
Hoxc9P09633 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Hoxc9P09633 Gm44428-201ENSMUST00000204474 874 ntBASIC30.28■■■□□ 2.44
Hoxc9P09633 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
Hoxc9P09633 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
Hoxc9P09633 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Hoxc9P09633 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC30.27■■■□□ 2.44
Hoxc9P09633 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC30.27■■■□□ 2.44
Hoxc9P09633 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC30.26■■■□□ 2.43
Hoxc9P09633 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Hoxc9P09633 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
Hoxc9P09633 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.26■■■□□ 2.43
Hoxc9P09633 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Hoxc9P09633 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Hoxc9P09633 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
Hoxc9P09633 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC30.24■■■□□ 2.43
Hoxc9P09633 Gm5812-201ENSMUST00000061073 957 ntBASIC30.24■■■□□ 2.43
Hoxc9P09633 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC30.24■■■□□ 2.43
Hoxc9P09633 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Hoxc9P09633 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC30.22■■■□□ 2.43
Hoxc9P09633 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Hoxc9P09633 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
Hoxc9P09633 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
Hoxc9P09633 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Hoxc9P09633 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
Hoxc9P09633 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC30.19■■■□□ 2.42
Hoxc9P09633 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC30.18■■■□□ 2.42
Hoxc9P09633 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
Hoxc9P09633 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
Hoxc9P09633 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
Hoxc9P09633 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
Hoxc9P09633 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
Hoxc9P09633 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC30.15■■■□□ 2.42
Hoxc9P09633 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
Hoxc9P09633 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC30.14■■■□□ 2.42
Hoxc9P09633 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
Hoxc9P09633 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC30.12■■■□□ 2.41
Hoxc9P09633 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Hoxc9P09633 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC30.12■■■□□ 2.41
Hoxc9P09633 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Hoxc9P09633 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC30.11■■■□□ 2.41
Hoxc9P09633 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Hoxc9P09633 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC30.11■■■□□ 2.41
Hoxc9P09633 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
Hoxc9P09633 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Hoxc9P09633 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hoxc9P09633 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hoxc9P09633 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hoxc9P09633 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC30.07■■■□□ 2.4
Hoxc9P09633 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC30.07■■■□□ 2.4
Hoxc9P09633 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Hoxc9P09633 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
Hoxc9P09633 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC30.06■■■□□ 2.4
Hoxc9P09633 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Hoxc9P09633 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
Hoxc9P09633 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC30.05■■■□□ 2.4
Hoxc9P09633 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Hoxc9P09633 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Hoxc9P09633 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
Hoxc9P09633 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC30.02■■■□□ 2.4
Hoxc9P09633 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hoxc9P09633 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC30.02■■■□□ 2.4
Hoxc9P09633 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hoxc9P09633 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Hoxc9P09633 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Hoxc9P09633 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Hoxc9P09633 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
Hoxc9P09633 Gm43592-201ENSMUST00000196922 1165 ntBASIC29.99■■■□□ 2.39
Hoxc9P09633 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Hoxc9P09633 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
Hoxc9P09633 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Hoxc9P09633 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Hoxc9P09633 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Hoxc9P09633 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
Hoxc9P09633 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC29.98■■■□□ 2.39
Hoxc9P09633 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC29.98■■■□□ 2.39
Hoxc9P09633 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Hoxc9P09633 Fezf2-202ENSMUST00000224023 1917 ntBASIC29.98■■■□□ 2.39
Hoxc9P09633 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Hoxc9P09633 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Hoxc9P09633 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Hoxc9P09633 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC29.97■■■□□ 2.39
Hoxc9P09633 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC29.97■■■□□ 2.39
Hoxc9P09633 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Hoxc9P09633 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Hoxc9P09633 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
Hoxc9P09633 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC29.95■■■□□ 2.39
Hoxc9P09633 Gm15546-201ENSMUST00000122095 826 ntBASIC29.95■■■□□ 2.39
Hoxc9P09633 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC29.95■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 52.1 ms