Protein–RNA interactions for Protein: O88196

Ttc3, E3 ubiquitin-protein ligase TTC3, mousemouse

Known RBP Predictions only

Length 1,979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc3O88196 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
Ttc3O88196 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC24.4■■□□□ 1.5
Ttc3O88196 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC24.39■■□□□ 1.49
Ttc3O88196 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
Ttc3O88196 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC24.38■■□□□ 1.49
Ttc3O88196 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Ttc3O88196 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ttc3O88196 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ttc3O88196 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Ttc3O88196 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Ttc3O88196 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Ttc3O88196 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.37■■□□□ 1.49
Ttc3O88196 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC24.36■■□□□ 1.49
Ttc3O88196 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC24.36■■□□□ 1.49
Ttc3O88196 Gm10420-201ENSMUST00000121713 882 ntBASIC24.36■■□□□ 1.49
Ttc3O88196 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ttc3O88196 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC24.36■■□□□ 1.49
Ttc3O88196 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Ttc3O88196 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Ttc3O88196 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC24.34■■□□□ 1.49
Ttc3O88196 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC24.34■■□□□ 1.49
Ttc3O88196 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
Ttc3O88196 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
Ttc3O88196 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
Ttc3O88196 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC24.31■■□□□ 1.48
Ttc3O88196 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
Ttc3O88196 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ttc3O88196 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Ttc3O88196 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc3O88196 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc3O88196 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc3O88196 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc3O88196 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Ttc3O88196 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ttc3O88196 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Ttc3O88196 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC24.28■■□□□ 1.48
Ttc3O88196 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc3O88196 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc3O88196 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc3O88196 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Ttc3O88196 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ttc3O88196 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC24.26■■□□□ 1.47
Ttc3O88196 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
Ttc3O88196 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Ttc3O88196 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
Ttc3O88196 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.25■■□□□ 1.47
Ttc3O88196 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ttc3O88196 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ttc3O88196 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ttc3O88196 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Ttc3O88196 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC24.23■■□□□ 1.47
Ttc3O88196 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC24.23■■□□□ 1.47
Ttc3O88196 Gm44428-201ENSMUST00000204474 874 ntBASIC24.23■■□□□ 1.47
Ttc3O88196 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ttc3O88196 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
Ttc3O88196 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
Ttc3O88196 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC24.23■■□□□ 1.47
Ttc3O88196 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ttc3O88196 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC24.22■■□□□ 1.47
Ttc3O88196 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
Ttc3O88196 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ttc3O88196 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
Ttc3O88196 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Ttc3O88196 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Ttc3O88196 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC24.21■■□□□ 1.47
Ttc3O88196 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ttc3O88196 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Ttc3O88196 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
Ttc3O88196 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC24.2■■□□□ 1.46
Ttc3O88196 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
Ttc3O88196 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC24.19■■□□□ 1.46
Ttc3O88196 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
Ttc3O88196 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
Ttc3O88196 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Ttc3O88196 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ttc3O88196 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Ttc3O88196 Gm5067-201ENSMUST00000170449 1009 ntBASIC24.18■■□□□ 1.46
Ttc3O88196 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ttc3O88196 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ttc3O88196 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Ttc3O88196 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC24.17■■□□□ 1.46
Ttc3O88196 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ttc3O88196 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Ttc3O88196 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC24.17■■□□□ 1.46
Ttc3O88196 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ttc3O88196 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
Ttc3O88196 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC24.16■■□□□ 1.46
Ttc3O88196 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
Ttc3O88196 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ttc3O88196 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ttc3O88196 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ttc3O88196 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
Ttc3O88196 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC24.14■■□□□ 1.46
Ttc3O88196 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
Ttc3O88196 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC24.14■■□□□ 1.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms